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class TapasLMPredictionHead(nn.Module):
def __init__(self, config):
super().__init__()
self.transform = TapasPredictionHeadTransform(config)
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.decoder = nn.Linear(config.hidden_size, config.vocab_size, bias=False)
self.bias = nn.Parameter(torch.zeros(config.vocab_size))
# Need a link between the two variables so that the bias is correctly resized with `resize_token_embeddings`
self.decoder.bias = self.bias
def _tie_weights(self):
self.decoder.bias = self.bias
def forward(self, hidden_states):
hidden_states = self.transform(hidden_states)
hidden_states = self.decoder(hidden_states)
return hidden_states
|
class_definition
| 29,854 | 30,688 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,300 |
class TapasOnlyMLMHead(nn.Module):
def __init__(self, config):
super().__init__()
self.predictions = TapasLMPredictionHead(config)
def forward(self, sequence_output: torch.Tensor) -> torch.Tensor:
prediction_scores = self.predictions(sequence_output)
return prediction_scores
|
class_definition
| 30,777 | 31,093 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,301 |
class TapasPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = TapasConfig
base_model_prefix = "tapas"
supports_gradient_checkpointing = True
_supports_param_buffer_assignment = False
# Copied from transformers.models.bert.modeling_bert.BertPreTrainedModel._init_weights
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, nn.Linear):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
|
class_definition
| 31,096 | 32,340 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,302 |
class TapasModel(TapasPreTrainedModel):
"""
This class is a small change compared to [`BertModel`], taking into account the additional token type ids.
The model can behave as an encoder (with only self-attention) as well as a decoder, in which case a layer of
cross-attention is added between the self-attention layers, following the architecture described in [Attention is
all you need](https://arxiv.org/abs/1706.03762) by Ashish Vaswani, Noam Shazeer, Niki Parmar, Jakob Uszkoreit,
Llion Jones, Aidan N. Gomez, Lukasz Kaiser and Illia Polosukhin.
"""
def __init__(self, config, add_pooling_layer=True):
super().__init__(config)
self.config = config
self.embeddings = TapasEmbeddings(config)
self.encoder = TapasEncoder(config)
self.pooler = TapasPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.word_embeddings
def set_input_embeddings(self, value):
self.embeddings.word_embeddings = value
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=BaseModelOutputWithPooling, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, BaseModelOutputWithPooling]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasModel
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasModel.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="pt")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
self.warn_if_padding_and_no_attention_mask(input_ids, attention_mask)
input_shape = input_ids.size()
elif inputs_embeds is not None:
input_shape = inputs_embeds.size()[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
if token_type_ids is None:
token_type_ids = torch.zeros(
(*input_shape, len(self.config.type_vocab_sizes)), dtype=torch.long, device=device
)
# We can provide a self-attention mask of dimensions [batch_size, from_seq_length, to_seq_length]
# ourselves in which case we just need to make it broadcastable to all heads.
extended_attention_mask: torch.Tensor = self.get_extended_attention_mask(attention_mask, input_shape)
# If a 2D ou 3D attention mask is provided for the cross-attention
# we need to make broadcastabe to [batch_size, num_heads, seq_length, seq_length]
if self.config.is_decoder and encoder_hidden_states is not None:
encoder_batch_size, encoder_sequence_length, _ = encoder_hidden_states.size()
encoder_hidden_shape = (encoder_batch_size, encoder_sequence_length)
if encoder_attention_mask is None:
encoder_attention_mask = torch.ones(encoder_hidden_shape, device=device)
encoder_extended_attention_mask = self.invert_attention_mask(encoder_attention_mask)
else:
encoder_extended_attention_mask = None
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output = self.embeddings(
input_ids=input_ids, position_ids=position_ids, token_type_ids=token_type_ids, inputs_embeds=inputs_embeds
)
encoder_outputs = self.encoder(
embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_extended_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
return (sequence_output, pooled_output) + encoder_outputs[1:]
return BaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
|
class_definition
| 36,021 | 43,075 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,303 |
class TapasForMaskedLM(TapasPreTrainedModel):
_tied_weights_keys = ["cls.predictions.decoder.weight", "cls.predictions.decoder.bias"]
config_class = TapasConfig
base_model_prefix = "tapas"
def __init__(self, config):
super().__init__(config)
self.tapas = TapasModel(config, add_pooling_layer=False)
self.cls = TapasOnlyMLMHead(config)
# Initialize weights and apply final processing
self.post_init()
def get_output_embeddings(self):
return self.cls.predictions.decoder
def set_output_embeddings(self, new_embeddings):
self.cls.predictions.decoder = new_embeddings
self.cls.predictions.bias = new_embeddings.bias
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=MaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
**kwargs,
) -> Union[Tuple, MaskedLMOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForMaskedLM
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasForMaskedLM.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> inputs = tokenizer(
... table=table, queries="How many [MASK] has George [MASK] played in?", return_tensors="pt"
... )
>>> labels = tokenizer(
... table=table, queries="How many movies has George Clooney played in?", return_tensors="pt"
... )["input_ids"]
>>> outputs = model(**inputs, labels=labels)
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tapas(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
prediction_scores = self.cls(sequence_output)
masked_lm_loss = None
if labels is not None:
loss_fct = CrossEntropyLoss() # -100 index = padding token
masked_lm_loss = loss_fct(prediction_scores.view(-1, self.config.vocab_size), labels.view(-1))
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((masked_lm_loss,) + output) if masked_lm_loss is not None else output
return MaskedLMOutput(
loss=masked_lm_loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
|
class_definition
| 43,182 | 47,589 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,304 |
class TapasForQuestionAnswering(TapasPreTrainedModel):
def __init__(self, config: TapasConfig):
super().__init__(config)
# base model
self.tapas = TapasModel(config)
# dropout (only used when training)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# cell selection heads
if config.init_cell_selection_weights_to_zero:
# init_cell_selection_weights_to_zero: Whether the initial weights should be
# set to 0. This ensures that all tokens have the same prior probability.
self.output_weights = nn.Parameter(torch.zeros(config.hidden_size))
self.column_output_weights = nn.Parameter(torch.zeros(config.hidden_size))
else:
self.output_weights = nn.Parameter(torch.empty(config.hidden_size))
nn.init.normal_(
self.output_weights, std=config.initializer_range
) # here, a truncated normal is used in the original implementation
self.column_output_weights = nn.Parameter(torch.empty(config.hidden_size))
nn.init.normal_(
self.column_output_weights, std=config.initializer_range
) # here, a truncated normal is used in the original implementation
self.output_bias = nn.Parameter(torch.zeros([]))
self.column_output_bias = nn.Parameter(torch.zeros([]))
# aggregation head
if config.num_aggregation_labels > 0:
self.aggregation_classifier = nn.Linear(config.hidden_size, config.num_aggregation_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TableQuestionAnsweringOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
table_mask: Optional[torch.LongTensor] = None,
labels: Optional[torch.LongTensor] = None,
aggregation_labels: Optional[torch.LongTensor] = None,
float_answer: Optional[torch.FloatTensor] = None,
numeric_values: Optional[torch.FloatTensor] = None,
numeric_values_scale: Optional[torch.FloatTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple, TableQuestionAnsweringOutput]:
r"""
table_mask (`torch.LongTensor` of shape `(batch_size, seq_length)`, *optional*):
Mask for the table. Indicates which tokens belong to the table (1). Question tokens, table headers and
padding are 0.
labels (`torch.LongTensor` of shape `(batch_size, seq_length)`, *optional*):
Labels per token for computing the hierarchical cell selection loss. This encodes the positions of the
answer appearing in the table. Can be obtained using [`AutoTokenizer`].
- 1 for tokens that are **part of the answer**,
- 0 for tokens that are **not part of the answer**.
aggregation_labels (`torch.LongTensor` of shape `(batch_size, )`, *optional*):
Aggregation function index for every example in the batch for computing the aggregation loss. Indices
should be in `[0, ..., config.num_aggregation_labels - 1]`. Only required in case of strong supervision for
aggregation (WikiSQL-supervised).
float_answer (`torch.FloatTensor` of shape `(batch_size, )`, *optional*):
Float answer for every example in the batch. Set to *float('nan')* for cell selection questions. Only
required in case of weak supervision (WTQ) to calculate the aggregate mask and regression loss.
numeric_values (`torch.FloatTensor` of shape `(batch_size, seq_length)`, *optional*):
Numeric values of every token, NaN for tokens which are not numeric values. Can be obtained using
[`AutoTokenizer`]. Only required in case of weak supervision for aggregation (WTQ) to calculate the
regression loss.
numeric_values_scale (`torch.FloatTensor` of shape `(batch_size, seq_length)`, *optional*):
Scale of the numeric values of every token. Can be obtained using [`AutoTokenizer`]. Only required in case
of weak supervision for aggregation (WTQ) to calculate the regression loss.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForQuestionAnswering
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-wtq")
>>> model = TapasForQuestionAnswering.from_pretrained("google/tapas-base-finetuned-wtq")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="pt")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> logits_aggregation = outputs.logits_aggregation
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tapas(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
sequence_output = outputs[0]
pooled_output = outputs[1]
sequence_output = self.dropout(sequence_output)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
# Construct indices for the table.
if token_type_ids is None:
token_type_ids = torch.zeros(
(*input_shape, len(self.config.type_vocab_sizes)), dtype=torch.long, device=device
)
token_types = [
"segment_ids",
"column_ids",
"row_ids",
"prev_labels",
"column_ranks",
"inv_column_ranks",
"numeric_relations",
]
row_ids = token_type_ids[:, :, token_types.index("row_ids")]
column_ids = token_type_ids[:, :, token_types.index("column_ids")]
row_index = IndexMap(
indices=torch.min(row_ids, torch.as_tensor(self.config.max_num_rows - 1, device=row_ids.device)),
num_segments=self.config.max_num_rows,
batch_dims=1,
)
col_index = IndexMap(
indices=torch.min(column_ids, torch.as_tensor(self.config.max_num_columns - 1, device=column_ids.device)),
num_segments=self.config.max_num_columns,
batch_dims=1,
)
cell_index = ProductIndexMap(row_index, col_index)
# Masks.
input_shape = input_ids.size() if input_ids is not None else inputs_embeds.size()[:-1]
device = input_ids.device if input_ids is not None else inputs_embeds.device
if attention_mask is None:
attention_mask = torch.ones(input_shape, device=device)
# Table cells only, without question tokens and table headers.
if table_mask is None:
table_mask = torch.where(row_ids > 0, torch.ones_like(row_ids), torch.zeros_like(row_ids))
# torch.FloatTensor[batch_size, seq_length]
input_mask_float = attention_mask.float().to(device)
table_mask_float = table_mask.float().to(device)
# Mask for cells that exist in the table (i.e. that are not padding).
cell_mask, _ = reduce_mean(input_mask_float, cell_index)
# Compute logits per token. These are used to select individual cells.
logits = compute_token_logits(sequence_output, self.config.temperature, self.output_weights, self.output_bias)
# Compute logits per column. These are used to select a column.
column_logits = None
if self.config.select_one_column:
column_logits = compute_column_logits(
sequence_output,
self.column_output_weights,
self.column_output_bias,
cell_index,
cell_mask,
self.config.allow_empty_column_selection,
)
# Aggregation logits
logits_aggregation = None
if self.config.num_aggregation_labels > 0:
logits_aggregation = self.aggregation_classifier(pooled_output)
# Total loss calculation
total_loss = 0.0
calculate_loss = False
if labels is not None:
calculate_loss = True
is_supervised = not self.config.num_aggregation_labels > 0 or not self.config.use_answer_as_supervision
# Semi-supervised cell selection in case of no aggregation:
# If the answer (the denotation) appears directly in the table we might
# select the answer without applying any aggregation function. There are
# some ambiguous cases, see utils._calculate_aggregate_mask for more info.
# `aggregate_mask` is 1 for examples where we chose to aggregate and 0
# for examples where we chose to select the answer directly.
# `labels` encodes the positions of the answer appearing in the table.
if is_supervised:
aggregate_mask = None
else:
if float_answer is not None:
assert (
labels.shape[0] == float_answer.shape[0]
), "Make sure the answers are a FloatTensor of shape (batch_size,)"
# <float32>[batch_size]
aggregate_mask = _calculate_aggregate_mask(
float_answer,
pooled_output,
self.config.cell_selection_preference,
labels,
self.aggregation_classifier,
)
else:
raise ValueError("You have to specify float answers in order to calculate the aggregate mask")
# Cell selection log-likelihood
if self.config.average_logits_per_cell:
logits_per_cell, _ = reduce_mean(logits, cell_index)
logits = gather(logits_per_cell, cell_index)
dist_per_token = torch.distributions.Bernoulli(logits=logits)
# Compute cell selection loss per example.
selection_loss_per_example = None
if not self.config.select_one_column:
weight = torch.where(
labels == 0,
torch.ones_like(labels, dtype=torch.float32),
self.config.positive_label_weight * torch.ones_like(labels, dtype=torch.float32),
)
selection_loss_per_token = -dist_per_token.log_prob(labels) * weight
selection_loss_per_example = torch.sum(selection_loss_per_token * input_mask_float, dim=1) / (
torch.sum(input_mask_float, dim=1) + EPSILON_ZERO_DIVISION
)
else:
selection_loss_per_example, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
dist_per_token = torch.distributions.Bernoulli(logits=logits)
# Supervised cell selection
if self.config.disable_per_token_loss:
pass
elif is_supervised:
total_loss += torch.mean(selection_loss_per_example)
else:
# For the not supervised case, do not assign loss for cell selection
total_loss += torch.mean(selection_loss_per_example * (1.0 - aggregate_mask))
# Semi-supervised regression loss and supervised loss for aggregations
if self.config.num_aggregation_labels > 0:
if is_supervised:
# Note that `aggregate_mask` is None if the setting is supervised.
if aggregation_labels is not None:
assert (
labels.shape[0] == aggregation_labels.shape[0]
), "Make sure the aggregation labels are a LongTensor of shape (batch_size,)"
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
else:
raise ValueError(
"You have to specify aggregation labels in order to calculate the aggregation loss"
)
else:
# Set aggregation labels to zeros
aggregation_labels = torch.zeros(labels.shape[0], dtype=torch.long, device=labels.device)
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
if self.config.use_answer_as_supervision:
if numeric_values is not None and numeric_values_scale is not None:
assert numeric_values.shape == numeric_values_scale.shape
# Add regression loss for numeric answers which require aggregation.
answer_loss, large_answer_loss_mask = _calculate_regression_loss(
float_answer,
aggregate_mask,
dist_per_token,
numeric_values,
numeric_values_scale,
table_mask_float,
logits_aggregation,
self.config,
)
per_example_additional_loss += answer_loss
# Zero loss for examples with answer_loss > cutoff.
per_example_additional_loss *= large_answer_loss_mask
else:
raise ValueError(
"You have to specify numeric values and numeric values scale in order to calculate the"
" regression loss"
)
total_loss += torch.mean(per_example_additional_loss)
else:
# if no label ids are provided, set them to zeros in order to properly compute logits
labels = torch.zeros_like(logits)
_, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
if not return_dict:
output = (logits, logits_aggregation) + outputs[2:]
return ((total_loss,) + output) if calculate_loss else output
return TableQuestionAnsweringOutput(
loss=total_loss if calculate_loss else None,
logits=logits,
logits_aggregation=logits_aggregation,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
|
class_definition
| 47,941 | 64,547 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,305 |
class TapasForSequenceClassification(TapasPreTrainedModel):
def __init__(self, config):
super().__init__(config)
self.num_labels = config.num_labels
self.tapas = TapasModel(config)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
self.classifier = nn.Linear(config.hidden_size, config.num_labels)
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=SequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
input_ids: Optional[torch.LongTensor] = None,
attention_mask: Optional[torch.FloatTensor] = None,
token_type_ids: Optional[torch.LongTensor] = None,
position_ids: Optional[torch.LongTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
inputs_embeds: Optional[torch.FloatTensor] = None,
labels: Optional[torch.LongTensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[Tuple[torch.Tensor], SequenceClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy). Note: this is called
"classification_class_index" in the original implementation.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForSequenceClassification
>>> import torch
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> model = TapasForSequenceClassification.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = [
... "There is only one actor who is 45 years old",
... "There are 3 actors which played in more than 60 movies",
... ]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="pt")
>>> labels = torch.tensor([1, 0]) # 1 means entailed, 0 means refuted
>>> outputs = model(**inputs, labels=labels)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.tapas(
input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
)
pooled_output = outputs[1]
pooled_output = self.dropout(pooled_output)
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
|
class_definition
| 64,798 | 69,829 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,306 |
class AverageApproximationFunction(str, enum.Enum):
RATIO = "ratio"
FIRST_ORDER = "first_order"
SECOND_ORDER = "second_order"
|
class_definition
| 69,858 | 69,995 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,307 |
class IndexMap:
"""Index grouping entries within a tensor."""
def __init__(self, indices, num_segments, batch_dims=0):
"""
Creates an index
Args:
indices (`torch.LongTensor`, same shape as a *values* Tensor to which the indices refer):
Tensor containing the indices.
num_segments (`torch.LongTensor`):
Scalar tensor, the number of segments. All elements in a batched segmented tensor must have the same
number of segments (although many segments can be empty).
batch_dims (`int`, *optional*, defaults to 0):
The number of batch dimensions. The first *batch_dims* dimensions of a SegmentedTensor are treated as
batch dimensions. Segments in different batch elements are always distinct even if they have the same
index.
"""
self.indices = torch.as_tensor(indices)
self.num_segments = torch.as_tensor(num_segments, device=indices.device)
self.batch_dims = batch_dims
def batch_shape(self):
return self.indices.size()[: self.batch_dims] # returns a torch.Size object
|
class_definition
| 70,055 | 71,230 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,308 |
class ProductIndexMap(IndexMap):
"""The product of two indices."""
def __init__(self, outer_index, inner_index):
"""
Combines indices i and j into pairs (i, j). The result is an index where each segment (i, j) is the
intersection of segments i and j. For example if the inputs represent table cells indexed by respectively rows
and columns the output will be a table indexed by (row, column) pairs, i.e. by cell. The implementation
combines indices {0, .., n - 1} and {0, .., m - 1} into {0, .., nm - 1}. The output has *num_segments* equal to
*outer_index.num_segments* * *inner_index.num_segments*
Args:
outer_index (`IndexMap`):
IndexMap.
inner_index (`IndexMap`):
IndexMap, must have the same shape as *outer_index*.
"""
if outer_index.batch_dims != inner_index.batch_dims:
raise ValueError("outer_index.batch_dims and inner_index.batch_dims must be the same.")
super().__init__(
indices=(inner_index.indices + outer_index.indices * inner_index.num_segments),
num_segments=inner_index.num_segments * outer_index.num_segments,
batch_dims=inner_index.batch_dims,
)
self.outer_index = outer_index
self.inner_index = inner_index
def project_outer(self, index):
"""Projects an index with the same index set onto the outer components."""
indices = torch.div(index.indices, self.inner_index.num_segments, rounding_mode="floor").type(torch.long)
return IndexMap(indices=indices, num_segments=self.outer_index.num_segments, batch_dims=index.batch_dims)
def project_inner(self, index):
"""Projects an index with the same index set onto the inner components."""
return IndexMap(
indices=torch.fmod(index.indices, self.inner_index.num_segments)
.type(torch.float)
.floor()
.type(torch.long),
num_segments=self.inner_index.num_segments,
batch_dims=index.batch_dims,
)
|
class_definition
| 71,233 | 73,340 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tapas.py
| null | 5,309 |
class TFTableQuestionAnsweringOutput(ModelOutput):
"""
Output type of [`TFTapasForQuestionAnswering`].
Args:
loss (`tf.Tensor` of shape `(1,)`, *optional*, returned when `labels` (and possibly `answer`, `aggregation_labels`, `numeric_values` and `numeric_values_scale` are provided)):
Total loss as the sum of the hierarchical cell selection log-likelihood loss and (optionally) the
semi-supervised regression loss and (optionally) supervised loss for aggregations.
logits (`tf.Tensor` of shape `(batch_size, sequence_length)`):
Prediction scores of the cell selection head, for every token.
logits_aggregation (`tf.Tensor`, *optional*, of shape `(batch_size, num_aggregation_labels)`):
Prediction scores of the aggregation head, for every aggregation operator.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`. Hidden-states of the model at the output of each layer plus
the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`. Attentions weights after the attention softmax, used to compute the weighted average in
the self-attention heads.
"""
loss: tf.Tensor | None = None
logits: tf.Tensor = None
logits_aggregation: tf.Tensor | None = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
|
class_definition
| 2,849 | 4,746 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,310 |
class TFTapasEmbeddings(keras.layers.Layer):
"""
Construct the embeddings from word, position and token_type embeddings. Same as BertEmbeddings but with a number of
additional token type embeddings to encode tabular structure.
"""
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.number_of_token_type_embeddings = len(config.type_vocab_sizes)
self.reset_position_index_per_cell = config.reset_position_index_per_cell
self.hidden_size = config.hidden_size
self.max_position_embeddings = config.max_position_embeddings
self.initializer_range = config.initializer_range
self.LayerNorm = keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = keras.layers.Dropout(rate=config.hidden_dropout_prob)
def build(self, input_shape=None):
with tf.name_scope("word_embeddings"):
self.weight = self.add_weight(
name="weight",
shape=[self.config.vocab_size, self.hidden_size],
initializer=get_initializer(self.initializer_range),
)
with tf.name_scope("position_embeddings"):
self.position_embeddings = self.add_weight(
name="embeddings",
shape=[self.max_position_embeddings, self.hidden_size],
initializer=get_initializer(self.initializer_range),
)
for i, type_vocab_size in enumerate(self.config.type_vocab_sizes):
with tf.name_scope(f"token_type_embeddings_{i}"):
setattr(
self,
f"token_type_embeddings_{i}",
self.add_weight(
name="embeddings",
shape=[type_vocab_size, self.hidden_size],
initializer=get_initializer(self.initializer_range),
),
)
if self.built:
return
self.built = True
if getattr(self, "LayerNorm", None) is not None:
with tf.name_scope(self.LayerNorm.name):
self.LayerNorm.build([None, None, self.config.hidden_size])
def call(
self,
input_ids: tf.Tensor = None,
position_ids: tf.Tensor = None,
token_type_ids: tf.Tensor = None,
inputs_embeds: tf.Tensor = None,
training: bool = False,
) -> tf.Tensor:
"""
Applies embedding based on inputs tensor.
Returns:
final_embeddings (`tf.Tensor`): output embedding tensor.
"""
assert not (input_ids is None and inputs_embeds is None)
if input_ids is not None:
input_shape = shape_list(input_ids)
else:
input_shape = shape_list(inputs_embeds)[:-1]
seq_length = input_shape[1]
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape + [self.number_of_token_type_embeddings], value=0)
if position_ids is None:
# create absolute position embeddings
position_ids = tf.expand_dims(tf.range(start=0, limit=seq_length), axis=0)
position_ids = tf.broadcast_to(position_ids, shape=input_shape)
# when self.config.reset_position_index_per_cell is set to True, create relative position embeddings
if self.reset_position_index_per_cell:
# shape (batch_size, seq_len)
col_index = IndexMap(token_type_ids[:, :, 1], self.config.type_vocab_sizes[1], batch_dims=1)
# shape (batch_size, seq_len)
row_index = IndexMap(token_type_ids[:, :, 2], self.config.type_vocab_sizes[2], batch_dims=1)
# shape (batch_size, seq_len)
full_index = ProductIndexMap(col_index, row_index)
# shape (max_rows * max_columns,). First absolute position for every cell
first_position_per_segment = reduce_min(position_ids, full_index)[0]
# ? shape (batch_size, seq_len). First absolute position of the cell for every token
first_position = gather(first_position_per_segment, full_index)
# shape (1, seq_len)
position = tf.expand_dims(tf.range(start=0, limit=seq_length), axis=0)
position_ids = tf.math.minimum(self.max_position_embeddings - 1, position - first_position)
if input_ids is not None:
check_embeddings_within_bounds(input_ids, self.config.vocab_size)
inputs_embeds = tf.gather(params=self.weight, indices=input_ids)
position_embeddings = tf.gather(self.position_embeddings, indices=position_ids)
final_embeddings = inputs_embeds + position_embeddings
for i in range(self.number_of_token_type_embeddings):
name = f"token_type_embeddings_{i}"
final_embeddings += tf.gather(params=getattr(self, name), indices=token_type_ids[:, :, i])
final_embeddings = self.LayerNorm(inputs=final_embeddings)
final_embeddings = self.dropout(inputs=final_embeddings, training=training)
return final_embeddings
|
class_definition
| 4,749 | 9,959 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,311 |
class TFTapasSelfAttention(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number "
f"of attention heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.sqrt_att_head_size = math.sqrt(self.attention_head_size)
self.query = keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="key"
)
self.value = keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = keras.layers.Dropout(rate=config.attention_probs_dropout_prob)
self.is_decoder = config.is_decoder
self.config = config
def transpose_for_scores(self, tensor: tf.Tensor, batch_size: int) -> tf.Tensor:
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
tensor = tf.reshape(tensor=tensor, shape=(batch_size, -1, self.num_attention_heads, self.attention_head_size))
# Transpose the tensor from [batch_size, seq_length, num_attention_heads, attention_head_size] to [batch_size, num_attention_heads, seq_length, attention_head_size]
return tf.transpose(tensor, perm=[0, 2, 1, 3])
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: tf.Tensor,
encoder_attention_mask: tf.Tensor,
past_key_value: Tuple[tf.Tensor],
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
batch_size = shape_list(hidden_states)[0]
mixed_query_layer = self.query(inputs=hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(inputs=encoder_hidden_states), batch_size)
value_layer = self.transpose_for_scores(self.value(inputs=encoder_hidden_states), batch_size)
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(inputs=hidden_states), batch_size)
value_layer = self.transpose_for_scores(self.value(inputs=hidden_states), batch_size)
key_layer = tf.concat([past_key_value[0], key_layer], axis=2)
value_layer = tf.concat([past_key_value[1], value_layer], axis=2)
else:
key_layer = self.transpose_for_scores(self.key(inputs=hidden_states), batch_size)
value_layer = self.transpose_for_scores(self.value(inputs=hidden_states), batch_size)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
if self.is_decoder:
# if cross_attention save Tuple(tf.Tensor, tf.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(tf.Tensor, tf.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
# (batch size, num_heads, seq_len_q, seq_len_k)
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
dk = tf.cast(self.sqrt_att_head_size, dtype=attention_scores.dtype)
attention_scores = tf.divide(attention_scores, dk)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in TFTapasModel call() function)
attention_scores = tf.add(attention_scores, attention_mask)
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(logits=attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(inputs=attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = tf.multiply(attention_probs, head_mask)
attention_output = tf.matmul(attention_probs, value_layer)
attention_output = tf.transpose(attention_output, perm=[0, 2, 1, 3])
# (batch_size, seq_len_q, all_head_size)
attention_output = tf.reshape(tensor=attention_output, shape=(batch_size, -1, self.all_head_size))
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "query", None) is not None:
with tf.name_scope(self.query.name):
self.query.build([None, None, self.config.hidden_size])
if getattr(self, "key", None) is not None:
with tf.name_scope(self.key.name):
self.key.build([None, None, self.config.hidden_size])
if getattr(self, "value", None) is not None:
with tf.name_scope(self.value.name):
self.value.build([None, None, self.config.hidden_size])
|
class_definition
| 10,055 | 16,875 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,312 |
class TFTapasSelfOutput(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = keras.layers.Dropout(rate=config.hidden_dropout_prob)
self.config = config
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
hidden_states = self.LayerNorm(inputs=hidden_states + input_tensor)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.hidden_size])
if getattr(self, "LayerNorm", None) is not None:
with tf.name_scope(self.LayerNorm.name):
self.LayerNorm.build([None, None, self.config.hidden_size])
|
class_definition
| 16,968 | 18,297 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,313 |
class TFTapasAttention(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.self_attention = TFTapasSelfAttention(config, name="self")
self.dense_output = TFTapasSelfOutput(config, name="output")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
input_tensor: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: tf.Tensor,
encoder_attention_mask: tf.Tensor,
past_key_value: Tuple[tf.Tensor],
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
self_outputs = self.self_attention(
hidden_states=input_tensor,
attention_mask=attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=past_key_value,
output_attentions=output_attentions,
training=training,
)
attention_output = self.dense_output(
hidden_states=self_outputs[0], input_tensor=input_tensor, training=training
)
# add attentions (possibly with past_key_value) if we output them
outputs = (attention_output,) + self_outputs[1:]
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "self_attention", None) is not None:
with tf.name_scope(self.self_attention.name):
self.self_attention.build(None)
if getattr(self, "dense_output", None) is not None:
with tf.name_scope(self.dense_output.name):
self.dense_output.build(None)
|
class_definition
| 18,389 | 20,225 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,314 |
class TFTapasIntermediate(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
self.config = config
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.hidden_size])
|
class_definition
| 20,320 | 21,344 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,315 |
class TFTapasOutput(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.LayerNorm = keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.dropout = keras.layers.Dropout(rate=config.hidden_dropout_prob)
self.config = config
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
hidden_states = self.LayerNorm(inputs=hidden_states + input_tensor)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.intermediate_size])
if getattr(self, "LayerNorm", None) is not None:
with tf.name_scope(self.LayerNorm.name):
self.LayerNorm.build([None, None, self.config.hidden_size])
|
class_definition
| 21,433 | 22,764 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,316 |
class TFTapasLayer(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.attention = TFTapasAttention(config, name="attention")
self.is_decoder = config.is_decoder
self.add_cross_attention = config.add_cross_attention
if self.add_cross_attention:
if not self.is_decoder:
raise ValueError(f"{self} should be used as a decoder model if cross attention is added")
self.crossattention = TFTapasAttention(config, name="crossattention")
self.intermediate = TFTapasIntermediate(config, name="intermediate")
self.bert_output = TFTapasOutput(config, name="output")
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: tf.Tensor | None,
encoder_attention_mask: tf.Tensor | None,
past_key_value: Tuple[tf.Tensor] | None,
output_attentions: bool,
training: bool = False,
) -> Tuple[tf.Tensor]:
# decoder uni-directional self-attention cached key/values tuple is at positions 1,2
self_attn_past_key_value = past_key_value[:2] if past_key_value is not None else None
self_attention_outputs = self.attention(
input_tensor=hidden_states,
attention_mask=attention_mask,
head_mask=head_mask,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_value=self_attn_past_key_value,
output_attentions=output_attentions,
training=training,
)
attention_output = self_attention_outputs[0]
# if decoder, the last output is tuple of self-attn cache
if self.is_decoder:
outputs = self_attention_outputs[1:-1]
present_key_value = self_attention_outputs[-1]
else:
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
cross_attn_present_key_value = None
if self.is_decoder and encoder_hidden_states is not None:
if not hasattr(self, "crossattention"):
raise ValueError(
f"If `encoder_hidden_states` are passed, {self} has to be instantiated with cross-attention layers"
" by setting `config.add_cross_attention=True`"
)
# cross_attn cached key/values tuple is at positions 3,4 of past_key_value tuple
cross_attn_past_key_value = past_key_value[-2:] if past_key_value is not None else None
cross_attention_outputs = self.crossattention(
input_tensor=attention_output,
attention_mask=attention_mask,
head_mask=head_mask,
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=cross_attn_past_key_value,
output_attentions=output_attentions,
training=training,
)
attention_output = cross_attention_outputs[0]
outputs = outputs + cross_attention_outputs[1:-1] # add cross attentions if we output attention weights
# add cross-attn cache to positions 3,4 of present_key_value tuple
cross_attn_present_key_value = cross_attention_outputs[-1]
present_key_value = present_key_value + cross_attn_present_key_value
intermediate_output = self.intermediate(hidden_states=attention_output)
layer_output = self.bert_output(
hidden_states=intermediate_output, input_tensor=attention_output, training=training
)
outputs = (layer_output,) + outputs # add attentions if we output them
# if decoder, return the attn key/values as the last output
if self.is_decoder:
outputs = outputs + (present_key_value,)
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "attention", None) is not None:
with tf.name_scope(self.attention.name):
self.attention.build(None)
if getattr(self, "intermediate", None) is not None:
with tf.name_scope(self.intermediate.name):
self.intermediate.build(None)
if getattr(self, "bert_output", None) is not None:
with tf.name_scope(self.bert_output.name):
self.bert_output.build(None)
if getattr(self, "crossattention", None) is not None:
with tf.name_scope(self.crossattention.name):
self.crossattention.build(None)
|
class_definition
| 22,852 | 27,587 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,317 |
class TFTapasEncoder(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.layer = [TFTapasLayer(config, name=f"layer_._{i}") for i in range(config.num_hidden_layers)]
def call(
self,
hidden_states: tf.Tensor,
attention_mask: tf.Tensor,
head_mask: tf.Tensor,
encoder_hidden_states: tf.Tensor | None,
encoder_attention_mask: tf.Tensor | None,
past_key_values: Tuple[Tuple[tf.Tensor]] | None,
use_cache: Optional[bool],
output_attentions: bool,
output_hidden_states: bool,
return_dict: bool,
training: bool = False,
) -> Union[TFBaseModelOutputWithPastAndCrossAttentions, Tuple[tf.Tensor]]:
all_hidden_states = () if output_hidden_states else None
all_attentions = () if output_attentions else None
all_cross_attentions = () if output_attentions and self.config.add_cross_attention else None
next_decoder_cache = () if use_cache else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
past_key_value = past_key_values[i] if past_key_values is not None else None
layer_outputs = layer_module(
hidden_states=hidden_states,
attention_mask=attention_mask,
head_mask=head_mask[i],
encoder_hidden_states=encoder_hidden_states,
encoder_attention_mask=encoder_attention_mask,
past_key_value=past_key_value,
output_attentions=output_attentions,
training=training,
)
hidden_states = layer_outputs[0]
if use_cache:
next_decoder_cache += (layer_outputs[-1],)
if output_attentions:
all_attentions = all_attentions + (layer_outputs[1],)
if self.config.add_cross_attention and encoder_hidden_states is not None:
all_cross_attentions = all_cross_attentions + (layer_outputs[2],)
# Add last layer
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(
v for v in [hidden_states, all_hidden_states, all_attentions, all_cross_attentions] if v is not None
)
return TFBaseModelOutputWithPastAndCrossAttentions(
last_hidden_state=hidden_states,
past_key_values=next_decoder_cache,
hidden_states=all_hidden_states,
attentions=all_attentions,
cross_attentions=all_cross_attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "layer", None) is not None:
for layer in self.layer:
with tf.name_scope(layer.name):
layer.build(None)
|
class_definition
| 27,677 | 30,761 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,318 |
class TFTapasPooler(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
activation="tanh",
name="dense",
)
self.config = config
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
# We "pool" the model by simply taking the hidden state corresponding
# to the first token.
first_token_tensor = hidden_states[:, 0]
pooled_output = self.dense(inputs=first_token_tensor)
return pooled_output
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.hidden_size])
|
class_definition
| 30,850 | 31,821 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,319 |
class TFTapasPredictionHeadTransform(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.hidden_size,
kernel_initializer=get_initializer(config.initializer_range),
name="dense",
)
if isinstance(config.hidden_act, str):
self.transform_act_fn = get_tf_activation(config.hidden_act)
else:
self.transform_act_fn = config.hidden_act
self.LayerNorm = keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="LayerNorm")
self.config = config
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.transform_act_fn(hidden_states)
hidden_states = self.LayerNorm(inputs=hidden_states)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.hidden_size])
if getattr(self, "LayerNorm", None) is not None:
with tf.name_scope(self.LayerNorm.name):
self.LayerNorm.build([None, None, self.config.hidden_size])
|
class_definition
| 31,927 | 33,326 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,320 |
class TFTapasLMPredictionHead(keras.layers.Layer):
def __init__(self, config: TapasConfig, input_embeddings: keras.layers.Layer, **kwargs):
super().__init__(**kwargs)
self.config = config
self.hidden_size = config.hidden_size
self.transform = TFTapasPredictionHeadTransform(config, name="transform")
# The output weights are the same as the input embeddings, but there is
# an output-only bias for each token.
self.input_embeddings = input_embeddings
def build(self, input_shape=None):
self.bias = self.add_weight(shape=(self.config.vocab_size,), initializer="zeros", trainable=True, name="bias")
if self.built:
return
self.built = True
if getattr(self, "transform", None) is not None:
with tf.name_scope(self.transform.name):
self.transform.build(None)
def get_output_embeddings(self) -> keras.layers.Layer:
return self.input_embeddings
def set_output_embeddings(self, value: tf.Variable):
self.input_embeddings.weight = value
self.input_embeddings.vocab_size = shape_list(value)[0]
def get_bias(self) -> Dict[str, tf.Variable]:
return {"bias": self.bias}
def set_bias(self, value: tf.Variable):
self.bias = value["bias"]
self.config.vocab_size = shape_list(value["bias"])[0]
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.transform(hidden_states=hidden_states)
seq_length = shape_list(hidden_states)[1]
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, self.hidden_size])
hidden_states = tf.matmul(a=hidden_states, b=self.input_embeddings.weight, transpose_b=True)
hidden_states = tf.reshape(tensor=hidden_states, shape=[-1, seq_length, self.config.vocab_size])
hidden_states = tf.nn.bias_add(value=hidden_states, bias=self.bias)
return hidden_states
|
class_definition
| 33,425 | 35,387 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,321 |
class TFTapasMLMHead(keras.layers.Layer):
def __init__(self, config: TapasConfig, input_embeddings: keras.layers.Layer, **kwargs):
super().__init__(**kwargs)
self.predictions = TFTapasLMPredictionHead(config, input_embeddings, name="predictions")
def call(self, sequence_output: tf.Tensor) -> tf.Tensor:
prediction_scores = self.predictions(hidden_states=sequence_output)
return prediction_scores
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "predictions", None) is not None:
with tf.name_scope(self.predictions.name):
self.predictions.build(None)
|
class_definition
| 35,477 | 36,183 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,322 |
class TFTapasMainLayer(keras.layers.Layer):
config_class = TapasConfig
def __init__(self, config: TapasConfig, add_pooling_layer: bool = True, **kwargs):
super().__init__(**kwargs)
self.config = config
self.embeddings = TFTapasEmbeddings(config, name="embeddings")
self.encoder = TFTapasEncoder(config, name="encoder")
self.pooler = TFTapasPooler(config, name="pooler") if add_pooling_layer else None
def get_input_embeddings(self) -> keras.layers.Layer:
return self.embeddings
def set_input_embeddings(self, value: tf.Variable):
self.embeddings.weight = value
self.embeddings.vocab_size = shape_list(value)[0]
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
if input_ids is not None and inputs_embeds is not None:
raise ValueError("You cannot specify both input_ids and inputs_embeds at the same time")
elif input_ids is not None:
input_shape = shape_list(input_ids)
elif inputs_embeds is not None:
input_shape = shape_list(inputs_embeds)[:-1]
else:
raise ValueError("You have to specify either input_ids or inputs_embeds")
if attention_mask is None:
attention_mask = tf.fill(dims=input_shape, value=1)
if token_type_ids is None:
token_type_ids = tf.fill(dims=input_shape + [len(self.config.type_vocab_sizes)], value=0)
embedding_output = self.embeddings(
input_ids=input_ids,
position_ids=position_ids,
token_type_ids=token_type_ids,
inputs_embeds=inputs_embeds,
training=training,
)
# We create a 3D attention mask from a 2D tensor mask.
# Sizes are [batch_size, 1, 1, to_seq_length]
# So we can broadcast to [batch_size, num_heads, from_seq_length, to_seq_length]
# this attention mask is more simple than the triangular masking of causal attention
# used in OpenAI GPT, we just need to prepare the broadcast dimension here.
extended_attention_mask = tf.reshape(attention_mask, (input_shape[0], 1, 1, input_shape[1]))
# Since attention_mask is 1.0 for positions we want to attend and 0.0 for
# masked positions, this operation will create a tensor which is 0.0 for
# positions we want to attend and -10000.0 for masked positions.
# Since we are adding it to the raw scores before the softmax, this is
# effectively the same as removing these entirely.
extended_attention_mask = tf.cast(extended_attention_mask, dtype=embedding_output.dtype)
one_cst = tf.constant(1.0, dtype=embedding_output.dtype)
ten_thousand_cst = tf.constant(-10000.0, dtype=embedding_output.dtype)
extended_attention_mask = tf.multiply(tf.subtract(one_cst, extended_attention_mask), ten_thousand_cst)
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
encoder_outputs = self.encoder(
hidden_states=embedding_output,
attention_mask=extended_attention_mask,
head_mask=head_mask,
encoder_hidden_states=None,
encoder_attention_mask=None,
past_key_values=None,
use_cache=None,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
pooled_output = self.pooler(hidden_states=sequence_output) if self.pooler is not None else None
if not return_dict:
return (
sequence_output,
pooled_output,
) + encoder_outputs[1:]
return TFBaseModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "embeddings", None) is not None:
with tf.name_scope(self.embeddings.name):
self.embeddings.build(None)
if getattr(self, "encoder", None) is not None:
with tf.name_scope(self.encoder.name):
self.encoder.build(None)
if getattr(self, "pooler", None) is not None:
with tf.name_scope(self.pooler.name):
self.pooler.build(None)
|
class_definition
| 36,206 | 42,030 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,323 |
class TFTapasPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = TapasConfig
base_model_prefix = "tapas"
@property
def input_signature(self):
return {
"input_ids": tf.TensorSpec((None, None), tf.int32, name="input_ids"),
"attention_mask": tf.TensorSpec((None, None), tf.float32, name="attention_mask"),
"token_type_ids": tf.TensorSpec((None, None, 7), tf.int32, name="token_type_ids"),
}
|
class_definition
| 42,033 | 42,634 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,324 |
class TFTapasModel(TFTapasPreTrainedModel):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.tapas = TFTapasMainLayer(config, name="tapas")
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFBaseModelOutputWithPooling, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: Optional[bool] = False,
) -> Union[TFBaseModelOutputWithPooling, Tuple[tf.Tensor]]:
r"""
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasModel
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasModel.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="tf")
>>> outputs = model(**inputs)
>>> last_hidden_states = outputs.last_hidden_state
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "tapas", None) is not None:
with tf.name_scope(self.tapas.name):
self.tapas.build(None)
|
class_definition
| 48,654 | 51,340 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,325 |
class TFTapasForMaskedLM(TFTapasPreTrainedModel, TFMaskedLanguageModelingLoss):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
if config.is_decoder:
logger.warning(
"If you want to use `TFTapasForMaskedLM` make sure `config.is_decoder=False` for "
"bi-directional self-attention."
)
self.tapas = TFTapasMainLayer(config, add_pooling_layer=False, name="tapas")
self.lm_head = TFTapasMLMHead(config, input_embeddings=self.tapas.embeddings, name="cls")
def get_lm_head(self) -> keras.layers.Layer:
return self.lm_head.predictions
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFMaskedLMOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[TFMaskedLMOutput, Tuple[tf.Tensor]]:
r"""
labels (`tf.Tensor` or `np.ndarray` of shape `(batch_size, sequence_length)`, *optional*):
Labels for computing the masked language modeling loss. Indices should be in `[-100, 0, ...,
config.vocab_size]` (see `input_ids` docstring) Tokens with indices set to `-100` are ignored (masked), the
loss is only computed for the tokens with labels in `[0, ..., config.vocab_size]`
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForMaskedLM
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base")
>>> model = TapasForMaskedLM.from_pretrained("google/tapas-base")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> inputs = tokenizer(
... table=table, queries="How many [MASK] has George [MASK] played in?", return_tensors="tf"
... )
>>> labels = tokenizer(
... table=table, queries="How many movies has George Clooney played in?", return_tensors="tf"
... )["input_ids"]
>>> outputs = model(**inputs, labels=labels)
>>> logits = outputs.logits
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
prediction_scores = self.lm_head(sequence_output)
loss = None if labels is None else self.hf_compute_loss(labels=labels, logits=prediction_scores)
if not return_dict:
output = (prediction_scores,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFMaskedLMOutput(
loss=loss,
logits=prediction_scores,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "tapas", None) is not None:
with tf.name_scope(self.tapas.name):
self.tapas.build(None)
if getattr(self, "lm_head", None) is not None:
with tf.name_scope(self.lm_head.name):
self.lm_head.build(None)
|
class_definition
| 51,447 | 55,846 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,326 |
class TFTapasComputeTokenLogits(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
self.temperature = config.temperature
# cell selection heads
with tf.name_scope("output"):
self.output_weights = self.add_weight(
name="output_weights",
shape=(config.hidden_size,),
dtype=tf.float32,
trainable=True,
initializer=tf.zeros_initializer()
if config.init_cell_selection_weights_to_zero
else keras.initializers.TruncatedNormal(stddev=config.initializer_range),
)
self.output_bias = self.add_weight(
name="output_bias", shape=(), trainable=True, initializer=tf.zeros_initializer()
)
def call(self, sequence_output: tf.Tensor) -> tf.Tensor:
"""
Computes logits per token
Args:
sequence_output (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Also known as last_hidden_state. Sequence of hidden-states at the output of the last layer of the
model.
Returns:
logits (`tf.Tensor` of shape `(batch_size, sequence_length)`): Logits per token.
"""
logits = (tf.einsum("bsj,j->bs", sequence_output, self.output_weights) + self.output_bias) / self.temperature
return logits
|
class_definition
| 55,849 | 57,304 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,327 |
class TFTapasComputeColumnLogits(keras.layers.Layer):
def __init__(self, config: TapasConfig, **kwargs):
super().__init__(**kwargs)
with tf.name_scope("column_output"):
self.column_output_weights = self.add_weight(
name="column_output_weights",
shape=[config.hidden_size],
dtype=tf.float32,
trainable=True,
initializer=tf.zeros_initializer()
if config.init_cell_selection_weights_to_zero
else keras.initializers.TruncatedNormal(stddev=config.initializer_range),
)
self.column_output_bias = self.add_weight(
name="column_output_bias", shape=(), trainable=True, initializer=tf.zeros_initializer()
)
def call(self, sequence_output, cell_index, cell_mask, allow_empty_column_selection) -> tf.Tensor:
"""
Computes the column logits.
Args:
sequence_output (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Also known as last_hidden_state. Sequence of hidden-states at the output of the last layer of the
model.
cell_index (`ProductIndexMap`):
Index that groups tokens into cells.
cell_mask (`tf.Tensor` of shape `(batch_size, max_num_rows * max_num_cols)`):
Mask for cells that exist in the table (i.e. that are not padding).
allow_empty_column_selection (`bool`):
Whether to allow not to select any column
Returns:
column_logits (`tf.Tensor`of shape `(batch_size, max_num_cols)`): Tensor containing the column logits for
every example in the batch.
"""
# First, compute the token logits (batch_size, seq_len) - without temperature
token_logits = tf.einsum("bsj,j->bs", sequence_output, self.column_output_weights) + self.column_output_bias
# Next, average the logits per cell (batch_size, max_num_cols*max_num_rows)
cell_logits, cell_logits_index = reduce_mean(token_logits, cell_index)
# Finally, average the logits per column (batch_size, max_num_cols)
column_index = cell_index.project_inner(cell_logits_index)
column_logits, out_index = reduce_sum(cell_logits * cell_mask, column_index)
cell_count, _ = reduce_sum(cell_mask, column_index)
column_logits /= cell_count + EPSILON_ZERO_DIVISION
# Mask columns that do not appear in the example.
is_padding = tf.logical_and(cell_count < 0.5, tf.not_equal(out_index.indices, 0))
column_logits += CLOSE_ENOUGH_TO_LOG_ZERO * tf.cast(is_padding, tf.float32)
if not allow_empty_column_selection:
column_logits += CLOSE_ENOUGH_TO_LOG_ZERO * tf.cast(tf.equal(out_index.indices, 0), tf.float32)
return column_logits
|
class_definition
| 57,307 | 60,204 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,328 |
class TFTapasForQuestionAnswering(TFTapasPreTrainedModel):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
# base model
self.tapas = TFTapasMainLayer(config, name="tapas")
# dropout
self.dropout = keras.layers.Dropout(config.hidden_dropout_prob)
self.compute_token_logits = TFTapasComputeTokenLogits(config, name="compute_token_logits")
self.compute_column_logits = TFTapasComputeColumnLogits(config, name="compute_column_logits")
if config.num_aggregation_labels > 0:
self.aggregation_classifier = keras.layers.Dense(
config.num_aggregation_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="aggregation_classifier",
)
self.config = config
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, sequence_length"))
@replace_return_docstrings(output_type=TFTableQuestionAnsweringOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
table_mask: np.ndarray | tf.Tensor | None = None,
aggregation_labels: np.ndarray | tf.Tensor | None = None,
float_answer: np.ndarray | tf.Tensor | None = None,
numeric_values: np.ndarray | tf.Tensor | None = None,
numeric_values_scale: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[TFTableQuestionAnsweringOutput, Tuple[tf.Tensor]]:
r"""
table_mask (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Mask for the table. Indicates which tokens belong to the table (1). Question tokens, table headers and
padding are 0.
labels (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Labels per token for computing the hierarchical cell selection loss. This encodes the positions of the
answer appearing in the table. Can be obtained using [`AutoTokenizer`].
- 1 for tokens that are **part of the answer**,
- 0 for tokens that are **not part of the answer**.
aggregation_labels (`tf.Tensor` of shape `(batch_size, )`, *optional*):
Aggregation function index for every example in the batch for computing the aggregation loss. Indices
should be in `[0, ..., config.num_aggregation_labels - 1]`. Only required in case of strong supervision for
aggregation (WikiSQL-supervised).
float_answer (`tf.Tensor` of shape `(batch_size, )`, *optional*):
Float answer for every example in the batch. Set to *float('nan')* for cell selection questions. Only
required in case of weak supervision (WTQ) to calculate the aggregate mask and regression loss.
numeric_values (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Numeric values of every token, NaN for tokens which are not numeric values. Can be obtained using
[`AutoTokenizer`]. Only required in case of weak supervision for aggregation (WTQ) to calculate the
regression loss.
numeric_values_scale (`tf.Tensor` of shape `(batch_size, seq_length)`, *optional*):
Scale of the numeric values of every token. Can be obtained using [`AutoTokenizer`]. Only required in case
of weak supervision for aggregation (WTQ) to calculate the regression loss.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForQuestionAnswering
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-wtq")
>>> model = TapasForQuestionAnswering.from_pretrained("google/tapas-base-finetuned-wtq")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = ["How many movies has George Clooney played in?", "How old is Brad Pitt?"]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="tf")
>>> outputs = model(**inputs)
>>> logits = outputs.logits
>>> logits_aggregation = outputs.logits_aggregation
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = outputs[0]
pooled_output = outputs[1]
sequence_output = self.dropout(sequence_output)
if input_ids is not None:
input_shape = shape_list(input_ids)
else:
input_shape = shape_list(inputs_embeds)[:-1]
# Construct indices for the table.
if token_type_ids is None:
token_type_ids = tf.fill(input_shape + [len(self.config.type_vocab_sizes)], 0)
token_types = [
"segment_ids",
"column_ids",
"row_ids",
"prev_labels",
"column_ranks",
"inv_column_ranks",
"numeric_relations",
]
row_ids = token_type_ids[:, :, token_types.index("row_ids")]
column_ids = token_type_ids[:, :, token_types.index("column_ids")]
# Construct indices for the table.
row_index = IndexMap(
indices=tf.minimum(tf.cast(row_ids, tf.int32), self.config.max_num_rows - 1),
num_segments=self.config.max_num_rows,
batch_dims=1,
)
col_index = IndexMap(
indices=tf.minimum(tf.cast(column_ids, tf.int32), self.config.max_num_columns - 1),
num_segments=self.config.max_num_columns,
batch_dims=1,
)
cell_index = ProductIndexMap(row_index, col_index)
# Masks.
input_shape = shape_list(input_ids) if input_ids is not None else shape_list(inputs_embeds)[:-1]
if attention_mask is None:
attention_mask = tf.ones(input_shape)
# Table cells only, without question tokens and table headers.
if table_mask is None:
table_mask = tf.where(row_ids > 0, tf.ones_like(row_ids), tf.zeros_like(row_ids))
# <float32>[batch_size, seq_length]
input_mask_float = tf.cast(attention_mask, tf.float32)
table_mask_float = tf.cast(table_mask, tf.float32)
# Mask for cells that exist in the table (i.e. that are not padding).
cell_mask, _ = reduce_mean(input_mask_float, cell_index)
# Compute logits per token. These are used to select individual cells.
logits = self.compute_token_logits(sequence_output)
# Compute logits per column. These are used to select a column.
column_logits = None
if self.config.select_one_column:
column_logits = self.compute_column_logits(
sequence_output, cell_index, cell_mask, self.config.allow_empty_column_selection
)
# Aggregate logits.
logits_aggregation = None
if self.config.num_aggregation_labels > 0:
logits_aggregation = self.aggregation_classifier(pooled_output)
# Total loss calculation
total_loss = tf.zeros(shape=(1,), dtype=tf.float32)
calculate_loss = False
if labels is not None:
calculate_loss = True
is_supervised = not self.config.num_aggregation_labels > 0 or not self.config.use_answer_as_supervision
# Semi-supervised cell selection in case of no aggregation:
# If the answer (the denotation) appears directly in the table we might
# select the answer without applying any aggregation function. There are
# some ambiguous cases, see utils._calculate_aggregate_mask for more info.
# `aggregate_mask` is 1 for examples where we chose to aggregate and 0
# for examples where we chose to select the answer directly.
# `labels` encodes the positions of the answer appearing in the table.
if is_supervised:
aggregate_mask = None
else:
if float_answer is not None:
assert (
shape_list(labels)[0] == shape_list(float_answer)[0]
), "Make sure the answers are a FloatTensor of shape (batch_size,)"
# <float32>[batch_size]
aggregate_mask = _calculate_aggregate_mask(
float_answer,
pooled_output,
self.config.cell_selection_preference,
labels,
self.aggregation_classifier,
)
else:
aggregate_mask = None
raise ValueError("You have to specify float answers in order to calculate the aggregate mask")
# Cell selection log-likelihood
if self.config.average_logits_per_cell:
logits_per_cell, _ = reduce_mean(logits, cell_index)
logits = gather(logits_per_cell, cell_index)
dist_per_token = tfp.distributions.Bernoulli(logits=logits)
# Compute cell selection loss per example.
selection_loss_per_example = None
if not self.config.select_one_column:
weight = tf.where(
labels == 0,
tf.ones_like(labels, dtype=tf.float32),
self.config.positive_label_weight * tf.ones_like(labels, dtype=tf.float32),
)
selection_loss_per_token = -dist_per_token.log_prob(labels) * weight
selection_loss_per_example = tf.reduce_sum(selection_loss_per_token * input_mask_float, axis=1) / (
tf.reduce_sum(input_mask_float, axis=1) + EPSILON_ZERO_DIVISION
)
else:
selection_loss_per_example, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
dist_per_token = tfp.distributions.Bernoulli(logits=logits)
# Supervised cell selection
if self.config.disable_per_token_loss:
pass
elif is_supervised:
total_loss += tf.reduce_mean(selection_loss_per_example)
else:
# For the not supervised case, do not assign loss for cell selection
total_loss += tf.reduce_mean(selection_loss_per_example * (1.0 - aggregate_mask))
# Semi-supervised regression loss and supervised loss for aggregations
if self.config.num_aggregation_labels > 0:
if is_supervised:
# Note that `aggregate_mask` is None if the setting is supervised.
if aggregation_labels is not None:
assert (
shape_list(labels)[0] == shape_list(aggregation_labels)[0]
), "Make sure the aggregation labels are a LongTensor of shape (batch_size,)"
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
else:
raise ValueError(
"You have to specify aggregation labels in order to calculate the aggregation loss"
)
else:
aggregation_labels = tf.zeros(shape_list(labels)[0], dtype=tf.int32)
per_example_additional_loss = _calculate_aggregation_loss(
logits_aggregation,
aggregate_mask,
aggregation_labels,
self.config.use_answer_as_supervision,
self.config.num_aggregation_labels,
self.config.aggregation_loss_weight,
)
if self.config.use_answer_as_supervision:
if numeric_values is not None and numeric_values_scale is not None:
assert shape_list(numeric_values) == shape_list(numeric_values_scale)
# Add regression loss for numeric answers which require aggregation.
answer_loss, large_answer_loss_mask = _calculate_regression_loss(
float_answer,
aggregate_mask,
dist_per_token,
numeric_values,
numeric_values_scale,
table_mask_float,
logits_aggregation,
self.config,
)
per_example_additional_loss += answer_loss
# Zero loss for examples with answer_loss > cutoff.
per_example_additional_loss *= large_answer_loss_mask
else:
raise ValueError(
"You have to specify numeric values and numeric values scale in order to calculate the"
" regression loss"
)
total_loss += tf.reduce_mean(per_example_additional_loss)
else:
# if no label ids are provided, set them to zeros in order to properly compute logits
labels = tf.zeros_like(logits)
_, logits = _single_column_cell_selection_loss(
logits, column_logits, labels, cell_index, col_index, cell_mask
)
if not return_dict:
output = (logits, logits_aggregation) + outputs[2:]
return ((total_loss,) + output) if calculate_loss else output
return TFTableQuestionAnsweringOutput(
loss=total_loss if calculate_loss else None,
logits=logits,
logits_aggregation=logits_aggregation,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "tapas", None) is not None:
with tf.name_scope(self.tapas.name):
self.tapas.build(None)
if getattr(self, "compute_token_logits", None) is not None:
with tf.name_scope(self.compute_token_logits.name):
self.compute_token_logits.build(None)
if getattr(self, "compute_column_logits", None) is not None:
with tf.name_scope(self.compute_column_logits.name):
self.compute_column_logits.build(None)
if getattr(self, "aggregation_classifier", None) is not None:
with tf.name_scope(self.aggregation_classifier.name):
self.aggregation_classifier.build([None, None, self.config.hidden_size])
|
class_definition
| 60,556 | 76,839 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,329 |
class TFTapasForSequenceClassification(TFTapasPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config: TapasConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.tapas = TFTapasMainLayer(config, name="tapas")
self.dropout = keras.layers.Dropout(config.hidden_dropout_prob, name="dropout")
self.classifier = keras.layers.Dense(
config.num_labels, kernel_initializer=get_initializer(config.initializer_range), name="classifier"
)
self.config = config
@unpack_inputs
@add_start_docstrings_to_model_forward(TAPAS_INPUTS_DOCSTRING.format("batch_size, num_choices, sequence_length"))
@replace_return_docstrings(output_type=TFSequenceClassifierOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
input_ids: TFModelInputType | None = None,
attention_mask: np.ndarray | tf.Tensor | None = None,
token_type_ids: np.ndarray | tf.Tensor | None = None,
position_ids: np.ndarray | tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
inputs_embeds: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[TFSequenceClassifierOutput, Tuple[tf.Tensor]]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the sequence classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy). Note: this is called
"classification_class_index" in the original implementation.
Returns:
Examples:
```python
>>> from transformers import AutoTokenizer, TapasForSequenceClassification
>>> import tensorflow as tf
>>> import pandas as pd
>>> tokenizer = AutoTokenizer.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> model = TapasForSequenceClassification.from_pretrained("google/tapas-base-finetuned-tabfact")
>>> data = {
... "Actors": ["Brad Pitt", "Leonardo Di Caprio", "George Clooney"],
... "Age": ["56", "45", "59"],
... "Number of movies": ["87", "53", "69"],
... }
>>> table = pd.DataFrame.from_dict(data)
>>> queries = [
... "There is only one actor who is 45 years old",
... "There are 3 actors which played in more than 60 movies",
... ]
>>> inputs = tokenizer(table=table, queries=queries, padding="max_length", return_tensors="tf")
>>> labels = tf.convert_to_tensor([1, 0]) # 1 means entailed, 0 means refuted
>>> outputs = model(**inputs, labels=labels)
>>> loss = outputs.loss
>>> logits = outputs.logits
```"""
outputs = self.tapas(
input_ids=input_ids,
attention_mask=attention_mask,
token_type_ids=token_type_ids,
position_ids=position_ids,
head_mask=head_mask,
inputs_embeds=inputs_embeds,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs[1]
pooled_output = self.dropout(inputs=pooled_output, training=training)
logits = self.classifier(inputs=pooled_output)
loss = None if labels is None else self.hf_compute_loss(labels=labels, logits=logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "tapas", None) is not None:
with tf.name_scope(self.tapas.name):
self.tapas.build(None)
if getattr(self, "dropout", None) is not None:
with tf.name_scope(self.dropout.name):
self.dropout.build(None)
if getattr(self, "classifier", None) is not None:
with tf.name_scope(self.classifier.name):
self.classifier.build([None, None, self.config.hidden_size])
|
class_definition
| 77,090 | 81,916 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,330 |
class AverageApproximationFunction(str, enum.Enum):
RATIO = "ratio"
FIRST_ORDER = "first_order"
SECOND_ORDER = "second_order"
|
class_definition
| 81,945 | 82,082 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,331 |
class IndexMap:
"""Index grouping entries within a tensor."""
def __init__(self, indices, num_segments, batch_dims=0):
"""
Creates an index.
Args:
indices: <int32> Tensor of indices, same shape as `values`.
num_segments: <int32> Scalar tensor, the number of segments. All elements
in a batched segmented tensor must have the same number of segments (although many segments can be empty).
batch_dims: Python integer, the number of batch dimensions. The first
`batch_dims` dimensions of a SegmentedTensor are treated as batch dimensions. Segments in different batch
elements are always distinct even if they have the same index.
"""
self.indices = tf.convert_to_tensor(indices)
self.num_segments = tf.convert_to_tensor(num_segments)
self.batch_dims = batch_dims
def batch_shape(self):
return tf.shape(self.indices)[: self.batch_dims]
|
class_definition
| 82,142 | 83,118 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,332 |
class ProductIndexMap(IndexMap):
"""The product of two indices."""
def __init__(self, outer_index, inner_index):
"""
Combines indices i and j into pairs (i, j). The result is an index where each segment (i, j) is the
intersection of segments i and j. For example if the inputs represent table cells indexed by respectively rows
and columns the output will be a table indexed by (row, column) pairs, i.e. by cell. The implementation
combines indices {0, .., n - 1} and {0, .., m - 1} into {0, .., nm - 1}. The output has `num_segments` equal to
`outer_index.num_segements` * `inner_index.num_segments`.
Args:
outer_index: IndexMap.
inner_index: IndexMap, must have the same shape as `outer_index`.
"""
if outer_index.batch_dims != inner_index.batch_dims:
raise ValueError("outer_index.batch_dims and inner_index.batch_dims must be the same.")
super(ProductIndexMap, self).__init__(
indices=(
inner_index.indices
+ outer_index.indices * tf.cast(inner_index.num_segments, inner_index.indices.dtype)
),
num_segments=inner_index.num_segments * outer_index.num_segments,
batch_dims=inner_index.batch_dims,
)
self.outer_index = outer_index
self.inner_index = inner_index
def project_outer(self, index):
"""Projects an index with the same index set onto the outer components."""
return IndexMap(
indices=tf.math.floordiv(index.indices, self.inner_index.num_segments),
num_segments=self.outer_index.num_segments,
batch_dims=index.batch_dims,
)
def project_inner(self, index):
"""Projects an index with the same index set onto the inner components."""
return IndexMap(
indices=tf.math.floormod(index.indices, self.inner_index.num_segments),
num_segments=self.inner_index.num_segments,
batch_dims=index.batch_dims,
)
|
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/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/modeling_tf_tapas.py
| null | 5,333 |
class TapasTruncationStrategy(ExplicitEnum):
"""
Possible values for the `truncation` argument in [`~TapasTokenizer.__call__`]. Useful for tab-completion in an IDE.
"""
DROP_ROWS_TO_FIT = "drop_rows_to_fit"
DO_NOT_TRUNCATE = "do_not_truncate"
|
class_definition
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/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,334 |
class TokenCoordinates:
column_index: int
row_index: int
token_index: int
|
class_definition
| 1,816 | 1,901 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,335 |
class TokenizedTable:
rows: List[List[List[str]]]
selected_tokens: List[TokenCoordinates]
|
class_definition
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/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,336 |
class SerializedExample:
tokens: List[str]
column_ids: List[int]
row_ids: List[int]
segment_ids: List[int]
|
class_definition
| 2,039 | 2,161 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,337 |
class TapasTokenizer(PreTrainedTokenizer):
r"""
Construct a TAPAS tokenizer. Based on WordPiece. Flattens a table and one or more related sentences to be used by
TAPAS models.
This tokenizer inherits from [`PreTrainedTokenizer`] which contains most of the main methods. Users should refer to
this superclass for more information regarding those methods. [`TapasTokenizer`] creates several token type ids to
encode tabular structure. To be more precise, it adds 7 token type ids, in the following order: `segment_ids`,
`column_ids`, `row_ids`, `prev_labels`, `column_ranks`, `inv_column_ranks` and `numeric_relations`:
- segment_ids: indicate whether a token belongs to the question (0) or the table (1). 0 for special tokens and
padding.
- column_ids: indicate to which column of the table a token belongs (starting from 1). Is 0 for all question
tokens, special tokens and padding.
- row_ids: indicate to which row of the table a token belongs (starting from 1). Is 0 for all question tokens,
special tokens and padding. Tokens of column headers are also 0.
- prev_labels: indicate whether a token was (part of) an answer to the previous question (1) or not (0). Useful in
a conversational setup (such as SQA).
- column_ranks: indicate the rank of a table token relative to a column, if applicable. For example, if you have a
column "number of movies" with values 87, 53 and 69, then the column ranks of these tokens are 3, 1 and 2
respectively. 0 for all question tokens, special tokens and padding.
- inv_column_ranks: indicate the inverse rank of a table token relative to a column, if applicable. For example, if
you have a column "number of movies" with values 87, 53 and 69, then the inverse column ranks of these tokens are
1, 3 and 2 respectively. 0 for all question tokens, special tokens and padding.
- numeric_relations: indicate numeric relations between the question and the tokens of the table. 0 for all
question tokens, special tokens and padding.
[`TapasTokenizer`] runs end-to-end tokenization on a table and associated sentences: punctuation splitting and
wordpiece.
Args:
vocab_file (`str`):
File containing the vocabulary.
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
do_basic_tokenize (`bool`, *optional*, defaults to `True`):
Whether or not to do basic tokenization before WordPiece.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
unk_token (`str`, *optional*, defaults to `"[UNK]"`):
The unknown token. A token that is not in the vocabulary cannot be converted to an ID and is set to be this
token instead.
sep_token (`str`, *optional*, defaults to `"[SEP]"`):
The separator token, which is used when building a sequence from multiple sequences, e.g. two sequences for
sequence classification or for a text and a question for question answering. It is also used as the last
token of a sequence built with special tokens.
pad_token (`str`, *optional*, defaults to `"[PAD]"`):
The token used for padding, for example when batching sequences of different lengths.
cls_token (`str`, *optional*, defaults to `"[CLS]"`):
The classifier token which is used when doing sequence classification (classification of the whole sequence
instead of per-token classification). It is the first token of the sequence when built with special tokens.
mask_token (`str`, *optional*, defaults to `"[MASK]"`):
The token used for masking values. This is the token used when training this model with masked language
modeling. This is the token which the model will try to predict.
empty_token (`str`, *optional*, defaults to `"[EMPTY]"`):
The token used for empty cell values in a table. Empty cell values include "", "n/a", "nan" and "?".
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters. This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
cell_trim_length (`int`, *optional*, defaults to -1):
If > 0: Trim cells so that the length is <= this value. Also disables further cell trimming, should thus be
used with `truncation` set to `True`.
max_column_id (`int`, *optional*):
Max column id to extract.
max_row_id (`int`, *optional*):
Max row id to extract.
strip_column_names (`bool`, *optional*, defaults to `False`):
Whether to add empty strings instead of column names.
update_answer_coordinates (`bool`, *optional*, defaults to `False`):
Whether to recompute the answer coordinates from the answer text.
min_question_length (`int`, *optional*):
Minimum length of each question in terms of tokens (will be skipped otherwise).
max_question_length (`int`, *optional*):
Maximum length of each question in terms of tokens (will be skipped otherwise).
clean_up_tokenization_spaces (`bool`, *optional*, defaults to `True`):
Whether or not to cleanup spaces after decoding, cleanup consists in removing potential artifacts like
extra spaces.
"""
vocab_files_names = VOCAB_FILES_NAMES
def __init__(
self,
vocab_file,
do_lower_case=True,
do_basic_tokenize=True,
never_split=None,
unk_token="[UNK]",
sep_token="[SEP]",
pad_token="[PAD]",
cls_token="[CLS]",
mask_token="[MASK]",
empty_token="[EMPTY]",
tokenize_chinese_chars=True,
strip_accents=None,
cell_trim_length: int = -1,
max_column_id: int = None,
max_row_id: int = None,
strip_column_names: bool = False,
update_answer_coordinates: bool = False,
min_question_length=None,
max_question_length=None,
model_max_length: int = 512,
additional_special_tokens: Optional[List[str]] = None,
clean_up_tokenization_spaces=True,
**kwargs,
):
if not is_pandas_available():
raise ImportError("Pandas is required for the TAPAS tokenizer.")
if additional_special_tokens is not None:
if empty_token not in additional_special_tokens:
additional_special_tokens.append(empty_token)
else:
additional_special_tokens = [empty_token]
if not os.path.isfile(vocab_file):
raise ValueError(
f"Can't find a vocabulary file at path '{vocab_file}'. To load the vocabulary from a Google pretrained"
" model use `tokenizer = BertTokenizer.from_pretrained(PRETRAINED_MODEL_NAME)`"
)
self.vocab = load_vocab(vocab_file)
self.ids_to_tokens = collections.OrderedDict([(ids, tok) for tok, ids in self.vocab.items()])
self.do_basic_tokenize = do_basic_tokenize
if do_basic_tokenize:
self.basic_tokenizer = BasicTokenizer(
do_lower_case=do_lower_case,
never_split=never_split,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
)
self.wordpiece_tokenizer = WordpieceTokenizer(vocab=self.vocab, unk_token=str(unk_token))
# Additional properties
self.cell_trim_length = cell_trim_length
self.max_column_id = (
max_column_id
if max_column_id is not None
else model_max_length
if model_max_length is not None
else VERY_LARGE_INTEGER
)
self.max_row_id = (
max_row_id
if max_row_id is not None
else model_max_length
if model_max_length is not None
else VERY_LARGE_INTEGER
)
self.strip_column_names = strip_column_names
self.update_answer_coordinates = update_answer_coordinates
self.min_question_length = min_question_length
self.max_question_length = max_question_length
super().__init__(
do_lower_case=do_lower_case,
do_basic_tokenize=do_basic_tokenize,
never_split=never_split,
unk_token=unk_token,
sep_token=sep_token,
pad_token=pad_token,
cls_token=cls_token,
mask_token=mask_token,
empty_token=empty_token,
tokenize_chinese_chars=tokenize_chinese_chars,
strip_accents=strip_accents,
cell_trim_length=cell_trim_length,
max_column_id=max_column_id,
max_row_id=max_row_id,
strip_column_names=strip_column_names,
update_answer_coordinates=update_answer_coordinates,
min_question_length=min_question_length,
max_question_length=max_question_length,
model_max_length=model_max_length,
additional_special_tokens=additional_special_tokens,
clean_up_tokenization_spaces=clean_up_tokenization_spaces,
**kwargs,
)
@property
def do_lower_case(self):
return self.basic_tokenizer.do_lower_case
@property
def vocab_size(self):
return len(self.vocab)
def get_vocab(self):
return dict(self.vocab, **self.added_tokens_encoder)
def _tokenize(self, text):
if format_text(text) == EMPTY_TEXT:
return [self.additional_special_tokens[0]]
split_tokens = []
if self.do_basic_tokenize:
for token in self.basic_tokenizer.tokenize(text, never_split=self.all_special_tokens):
# If the token is part of the never_split set
if token in self.basic_tokenizer.never_split:
split_tokens.append(token)
else:
split_tokens += self.wordpiece_tokenizer.tokenize(token)
else:
split_tokens = self.wordpiece_tokenizer.tokenize(text)
return split_tokens
def _convert_token_to_id(self, token):
"""Converts a token (str) in an id using the vocab."""
return self.vocab.get(token, self.vocab.get(self.unk_token))
def _convert_id_to_token(self, index):
"""Converts an index (integer) in a token (str) using the vocab."""
return self.ids_to_tokens.get(index, self.unk_token)
def convert_tokens_to_string(self, tokens):
"""Converts a sequence of tokens (string) in a single string."""
out_string = " ".join(tokens).replace(" ##", "").strip()
return out_string
def save_vocabulary(self, save_directory: str, filename_prefix: Optional[str] = None) -> Tuple[str]:
index = 0
if os.path.isdir(save_directory):
vocab_file = os.path.join(
save_directory, (filename_prefix + "-" if filename_prefix else "") + VOCAB_FILES_NAMES["vocab_file"]
)
else:
vocab_file = (filename_prefix + "-" if filename_prefix else "") + save_directory
with open(vocab_file, "w", encoding="utf-8") as writer:
for token, token_index in sorted(self.vocab.items(), key=lambda kv: kv[1]):
if index != token_index:
logger.warning(
f"Saving vocabulary to {vocab_file}: vocabulary indices are not consecutive."
" Please check that the vocabulary is not corrupted!"
)
index = token_index
writer.write(token + "\n")
index += 1
return (vocab_file,)
def create_attention_mask_from_sequences(self, query_ids: List[int], table_values: List[TableValue]) -> List[int]:
"""
Creates the attention mask according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the attention mask values.
"""
return [1] * (1 + len(query_ids) + 1 + len(table_values))
def create_segment_token_type_ids_from_sequences(
self, query_ids: List[int], table_values: List[TableValue]
) -> List[int]:
"""
Creates the segment token type IDs according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the segment token type IDs values.
"""
table_ids = list(zip(*table_values))[0] if table_values else []
return [0] * (1 + len(query_ids) + 1) + [1] * len(table_ids)
def create_column_token_type_ids_from_sequences(
self, query_ids: List[int], table_values: List[TableValue]
) -> List[int]:
"""
Creates the column token type IDs according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the column token type IDs values.
"""
table_column_ids = list(zip(*table_values))[1] if table_values else []
return [0] * (1 + len(query_ids) + 1) + list(table_column_ids)
def create_row_token_type_ids_from_sequences(
self, query_ids: List[int], table_values: List[TableValue]
) -> List[int]:
"""
Creates the row token type IDs according to the query token IDs and a list of table values.
Args:
query_ids (`List[int]`): list of token IDs corresponding to the ID.
table_values (`List[TableValue]`): lift of table values, which are named tuples containing the
token value, the column ID and the row ID of said token.
Returns:
`List[int]`: List of ints containing the row token type IDs values.
"""
table_row_ids = list(zip(*table_values))[2] if table_values else []
return [0] * (1 + len(query_ids) + 1) + list(table_row_ids)
def build_inputs_with_special_tokens(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None
) -> List[int]:
"""
Build model inputs from a question and flattened table for question answering or sequence classification tasks
by concatenating and adding special tokens.
Args:
token_ids_0 (`List[int]`): The ids of the question.
token_ids_1 (`List[int]`, *optional*): The ids of the flattened table.
Returns:
`List[int]`: The model input with special tokens.
"""
if token_ids_1 is None:
raise ValueError("With TAPAS, you must provide both question IDs and table IDs.")
return [self.cls_token_id] + token_ids_0 + [self.sep_token_id] + token_ids_1
def get_special_tokens_mask(
self, token_ids_0: List[int], token_ids_1: Optional[List[int]] = None, already_has_special_tokens: bool = False
) -> List[int]:
"""
Retrieve sequence ids from a token list that has no special tokens added. This method is called when adding
special tokens using the tokenizer `prepare_for_model` method.
Args:
token_ids_0 (`List[int]`):
List of question IDs.
token_ids_1 (`List[int]`, *optional*):
List of flattened table IDs.
already_has_special_tokens (`bool`, *optional*, defaults to `False`):
Whether or not the token list is already formatted with special tokens for the model.
Returns:
`List[int]`: A list of integers in the range [0, 1]: 1 for a special token, 0 for a sequence token.
"""
if already_has_special_tokens:
return super().get_special_tokens_mask(
token_ids_0=token_ids_0, token_ids_1=token_ids_1, already_has_special_tokens=True
)
if token_ids_1 is not None:
return [1] + ([0] * len(token_ids_0)) + [1] + ([0] * len(token_ids_1))
return [1] + ([0] * len(token_ids_0)) + [1]
@add_end_docstrings(TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def __call__(
self,
table: "pd.DataFrame",
queries: Optional[
Union[
TextInput,
PreTokenizedInput,
EncodedInput,
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
]
] = None,
answer_coordinates: Optional[Union[List[Tuple], List[List[Tuple]]]] = None,
answer_text: Optional[Union[List[TextInput], List[List[TextInput]]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Main method to tokenize and prepare for the model one or several sequence(s) related to a table.
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
queries (`str` or `List[str]`):
Question or batch of questions related to a table to be encoded. Note that in case of a batch, all
questions must refer to the **same** table.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. In case only a single table-question pair
is provided, then the answer_coordinates must be a single list of one or more tuples. Each tuple must
be a (row_index, column_index) pair. The first data row (not the column header row) has index 0. The
first column has index 0. In case a batch of table-question pairs is provided, then the
answer_coordinates must be a list of lists of tuples (each list corresponding to a single
table-question pair).
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. In case only a single table-question pair is
provided, then the answer_text must be a single list of one or more strings. Each string must be the
answer text of a corresponding answer coordinate. In case a batch of table-question pairs is provided,
then the answer_coordinates must be a list of lists of strings (each list corresponding to a single
table-question pair).
"""
assert isinstance(table, pd.DataFrame), "Table must be of type pd.DataFrame"
# Input type checking for clearer error
valid_query = False
# Check that query has a valid type
if queries is None or isinstance(queries, str):
valid_query = True
elif isinstance(queries, (list, tuple)):
if len(queries) == 0 or isinstance(queries[0], str):
valid_query = True
if not valid_query:
raise ValueError(
"queries input must of type `str` (single example), `List[str]` (batch or single pretokenized"
" example). "
)
is_batched = isinstance(queries, (list, tuple))
if is_batched:
return self.batch_encode_plus(
table=table,
queries=queries,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
else:
return self.encode_plus(
table=table,
query=queries,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def batch_encode_plus(
self,
table: "pd.DataFrame",
queries: Optional[
Union[
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
]
] = None,
answer_coordinates: Optional[List[List[Tuple]]] = None,
answer_text: Optional[List[List[TextInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare a table and a list of strings for the model.
<Tip warning={true}>
This method is deprecated, `__call__` should be used instead.
</Tip>
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
queries (`List[str]`):
Batch of questions related to a table to be encoded. Note that all questions must refer to the **same**
table.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. Each tuple must be a (row_index,
column_index) pair. The first data row (not the column header row) has index 0. The first column has
index 0. The answer_coordinates must be a list of lists of tuples (each list corresponding to a single
table-question pair).
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. In case a batch of table-question pairs is
provided, then the answer_coordinates must be a list of lists of strings (each list corresponding to a
single table-question pair). Each string must be the answer text of a corresponding answer coordinate.
"""
if return_token_type_ids is not None and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (answer_coordinates and not answer_text) or (not answer_coordinates and answer_text):
raise ValueError("In case you provide answers, both answer_coordinates and answer_text should be provided")
elif answer_coordinates is None and answer_text is None:
answer_coordinates = answer_text = [None] * len(queries)
if "is_split_into_words" in kwargs:
raise NotImplementedError("Currently TapasTokenizer only supports questions as strings.")
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
return self._batch_encode_plus(
table=table,
queries=queries,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _get_question_tokens(self, query):
"""Tokenizes the query, taking into account the max and min question length."""
query_tokens = self.tokenize(query)
if self.max_question_length is not None and len(query_tokens) > self.max_question_length:
logger.warning("Skipping query as its tokens are longer than the max question length")
return "", []
if self.min_question_length is not None and len(query_tokens) < self.min_question_length:
logger.warning("Skipping query as its tokens are shorter than the min question length")
return "", []
return query, query_tokens
def _batch_encode_plus(
self,
table,
queries: Union[
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
],
answer_coordinates: Optional[List[List[Tuple]]] = None,
answer_text: Optional[List[List[TextInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = None,
return_overflowing_tokens: bool = False,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
table_tokens = self._tokenize_table(table)
queries_tokens = []
for idx, query in enumerate(queries):
query, query_tokens = self._get_question_tokens(query)
queries[idx] = query
queries_tokens.append(query_tokens)
batch_outputs = self._batch_prepare_for_model(
table,
queries,
tokenized_table=table_tokens,
queries_tokens=queries_tokens,
answer_coordinates=answer_coordinates,
padding=padding,
truncation=truncation,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_overflowing_tokens=return_overflowing_tokens,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
return BatchEncoding(batch_outputs)
def _batch_prepare_for_model(
self,
raw_table: "pd.DataFrame",
raw_queries: Union[
List[TextInput],
List[PreTokenizedInput],
List[EncodedInput],
],
tokenized_table: Optional[TokenizedTable] = None,
queries_tokens: Optional[List[List[str]]] = None,
answer_coordinates: Optional[List[List[Tuple]]] = None,
answer_text: Optional[List[List[TextInput]]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = True,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
batch_outputs = {}
for index, example in enumerate(zip(raw_queries, queries_tokens, answer_coordinates, answer_text)):
raw_query, query_tokens, answer_coords, answer_txt = example
outputs = self.prepare_for_model(
raw_table,
raw_query,
tokenized_table=tokenized_table,
query_tokens=query_tokens,
answer_coordinates=answer_coords,
answer_text=answer_txt,
add_special_tokens=add_special_tokens,
padding=PaddingStrategy.DO_NOT_PAD.value, # we pad in batch afterwards
truncation=truncation,
max_length=max_length,
pad_to_multiple_of=None, # we pad in batch afterwards
padding_side=None, # we pad in batch afterward
return_attention_mask=False, # we pad in batch afterwards
return_token_type_ids=return_token_type_ids,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
return_tensors=None, # We convert the whole batch to tensors at the end
prepend_batch_axis=False,
verbose=verbose,
prev_answer_coordinates=answer_coordinates[index - 1] if index != 0 else None,
prev_answer_text=answer_text[index - 1] if index != 0 else None,
)
for key, value in outputs.items():
if key not in batch_outputs:
batch_outputs[key] = []
batch_outputs[key].append(value)
batch_outputs = self.pad(
batch_outputs,
padding=padding,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_attention_mask=return_attention_mask,
)
batch_outputs = BatchEncoding(batch_outputs, tensor_type=return_tensors)
return batch_outputs
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING)
def encode(
self,
table: "pd.DataFrame",
query: Optional[
Union[
TextInput,
PreTokenizedInput,
EncodedInput,
]
] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
**kwargs,
) -> List[int]:
"""
Prepare a table and a string for the model. This method does not return token type IDs, attention masks, etc.
which are necessary for the model to work correctly. Use that method if you want to build your processing on
your own, otherwise refer to `__call__`.
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
query (`str` or `List[str]`):
Question related to a table to be encoded.
"""
encoded_inputs = self.encode_plus(
table,
query=query,
add_special_tokens=add_special_tokens,
padding=padding,
truncation=truncation,
max_length=max_length,
return_tensors=return_tensors,
**kwargs,
)
return encoded_inputs["input_ids"]
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def encode_plus(
self,
table: "pd.DataFrame",
query: Optional[
Union[
TextInput,
PreTokenizedInput,
EncodedInput,
]
] = None,
answer_coordinates: Optional[List[Tuple]] = None,
answer_text: Optional[List[TextInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
) -> BatchEncoding:
"""
Prepare a table and a string for the model.
Args:
table (`pd.DataFrame`):
Table containing tabular data. Note that all cell values must be text. Use *.astype(str)* on a Pandas
dataframe to convert it to string.
query (`str` or `List[str]`):
Question related to a table to be encoded.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. The answer_coordinates must be a single
list of one or more tuples. Each tuple must be a (row_index, column_index) pair. The first data row
(not the column header row) has index 0. The first column has index 0.
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. The answer_text must be a single list of one or
more strings. Each string must be the answer text of a corresponding answer coordinate.
"""
if return_token_type_ids is not None and not add_special_tokens:
raise ValueError(
"Asking to return token_type_ids while setting add_special_tokens to False "
"results in an undefined behavior. Please set add_special_tokens to True or "
"set return_token_type_ids to None."
)
if (answer_coordinates and not answer_text) or (not answer_coordinates and answer_text):
raise ValueError("In case you provide answers, both answer_coordinates and answer_text should be provided")
if "is_split_into_words" in kwargs:
raise NotImplementedError("Currently TapasTokenizer only supports questions as strings.")
if return_offsets_mapping:
raise NotImplementedError(
"return_offset_mapping is not available when using Python tokenizers. "
"To use this feature, change your tokenizer to one deriving from "
"transformers.PreTrainedTokenizerFast."
)
return self._encode_plus(
table=table,
query=query,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
truncation=truncation,
padding=padding,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
return_token_type_ids=return_token_type_ids,
return_attention_mask=return_attention_mask,
return_special_tokens_mask=return_special_tokens_mask,
return_offsets_mapping=return_offsets_mapping,
return_length=return_length,
verbose=verbose,
**kwargs,
)
def _encode_plus(
self,
table: "pd.DataFrame",
query: Union[
TextInput,
PreTokenizedInput,
EncodedInput,
],
answer_coordinates: Optional[List[Tuple]] = None,
answer_text: Optional[List[TextInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = True,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
**kwargs,
):
if query is None:
query = ""
logger.warning(
"TAPAS is a question answering model but you have not passed a query. Please be aware that the "
"model will probably not behave correctly."
)
table_tokens = self._tokenize_table(table)
query, query_tokens = self._get_question_tokens(query)
return self.prepare_for_model(
table,
query,
tokenized_table=table_tokens,
query_tokens=query_tokens,
answer_coordinates=answer_coordinates,
answer_text=answer_text,
add_special_tokens=add_special_tokens,
truncation=truncation,
padding=padding,
max_length=max_length,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_tensors=return_tensors,
prepend_batch_axis=True,
return_attention_mask=return_attention_mask,
return_token_type_ids=return_token_type_ids,
return_special_tokens_mask=return_special_tokens_mask,
return_length=return_length,
verbose=verbose,
)
@add_end_docstrings(ENCODE_KWARGS_DOCSTRING, TAPAS_ENCODE_PLUS_ADDITIONAL_KWARGS_DOCSTRING)
def prepare_for_model(
self,
raw_table: "pd.DataFrame",
raw_query: Union[
TextInput,
PreTokenizedInput,
EncodedInput,
],
tokenized_table: Optional[TokenizedTable] = None,
query_tokens: Optional[TokenizedTable] = None,
answer_coordinates: Optional[List[Tuple]] = None,
answer_text: Optional[List[TextInput]] = None,
add_special_tokens: bool = True,
padding: Union[bool, str, PaddingStrategy] = False,
truncation: Union[bool, str, TapasTruncationStrategy] = False,
max_length: Optional[int] = None,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_tensors: Optional[Union[str, TensorType]] = None,
return_token_type_ids: Optional[bool] = True,
return_attention_mask: Optional[bool] = True,
return_special_tokens_mask: bool = False,
return_offsets_mapping: bool = False,
return_length: bool = False,
verbose: bool = True,
prepend_batch_axis: bool = False,
**kwargs,
) -> BatchEncoding:
"""
Prepares a sequence of input id so that it can be used by the model. It adds special tokens, truncates
sequences if overflowing while taking into account the special tokens.
Args:
raw_table (`pd.DataFrame`):
The original table before any transformation (like tokenization) was applied to it.
raw_query (`TextInput` or `PreTokenizedInput` or `EncodedInput`):
The original query before any transformation (like tokenization) was applied to it.
tokenized_table (`TokenizedTable`):
The table after tokenization.
query_tokens (`List[str]`):
The query after tokenization.
answer_coordinates (`List[Tuple]` or `List[List[Tuple]]`, *optional*):
Answer coordinates of each table-question pair in the batch. The answer_coordinates must be a single
list of one or more tuples. Each tuple must be a (row_index, column_index) pair. The first data row
(not the column header row) has index 0. The first column has index 0.
answer_text (`List[str]` or `List[List[str]]`, *optional*):
Answer text of each table-question pair in the batch. The answer_text must be a single list of one or
more strings. Each string must be the answer text of a corresponding answer coordinate.
"""
if isinstance(padding, bool):
if padding and (max_length is not None or pad_to_multiple_of is not None):
padding = PaddingStrategy.MAX_LENGTH
else:
padding = PaddingStrategy.DO_NOT_PAD
elif not isinstance(padding, PaddingStrategy):
padding = PaddingStrategy(padding)
if isinstance(truncation, bool):
if truncation:
truncation = TapasTruncationStrategy.DROP_ROWS_TO_FIT
else:
truncation = TapasTruncationStrategy.DO_NOT_TRUNCATE
elif not isinstance(truncation, TapasTruncationStrategy):
truncation = TapasTruncationStrategy(truncation)
encoded_inputs = {}
is_part_of_batch = False
prev_answer_coordinates, prev_answer_text = None, None
if "prev_answer_coordinates" in kwargs and "prev_answer_text" in kwargs:
is_part_of_batch = True
prev_answer_coordinates = kwargs["prev_answer_coordinates"]
prev_answer_text = kwargs["prev_answer_text"]
num_rows = self._get_num_rows(raw_table, truncation != TapasTruncationStrategy.DO_NOT_TRUNCATE)
num_columns = self._get_num_columns(raw_table)
_, _, num_tokens = self._get_table_boundaries(tokenized_table)
if truncation != TapasTruncationStrategy.DO_NOT_TRUNCATE:
num_rows, num_tokens = self._get_truncated_table_rows(
query_tokens, tokenized_table, num_rows, num_columns, max_length, truncation_strategy=truncation
)
table_data = list(self._get_table_values(tokenized_table, num_columns, num_rows, num_tokens))
query_ids = self.convert_tokens_to_ids(query_tokens)
table_ids = list(zip(*table_data))[0] if len(table_data) > 0 else list(zip(*table_data))
table_ids = self.convert_tokens_to_ids(list(table_ids))
if "return_overflowing_tokens" in kwargs and kwargs["return_overflowing_tokens"]:
raise ValueError("TAPAS does not return overflowing tokens as it works on tables.")
if add_special_tokens:
input_ids = self.build_inputs_with_special_tokens(query_ids, table_ids)
else:
input_ids = query_ids + table_ids
if max_length is not None and len(input_ids) > max_length:
raise ValueError(
"Could not encode the query and table header given the maximum length. Encoding the query and table "
f"header results in a length of {len(input_ids)} which is higher than the max_length of {max_length}"
)
encoded_inputs["input_ids"] = input_ids
segment_ids = self.create_segment_token_type_ids_from_sequences(query_ids, table_data)
column_ids = self.create_column_token_type_ids_from_sequences(query_ids, table_data)
row_ids = self.create_row_token_type_ids_from_sequences(query_ids, table_data)
if not is_part_of_batch or (prev_answer_coordinates is None and prev_answer_text is None):
# simply set the prev_labels to zeros
prev_labels = [0] * len(row_ids)
else:
prev_labels = self.get_answer_ids(
column_ids, row_ids, table_data, prev_answer_text, prev_answer_coordinates
)
# FIRST: parse both the table and question in terms of numeric values
raw_table = add_numeric_table_values(raw_table)
raw_query = add_numeric_values_to_question(raw_query)
# SECOND: add numeric-related features (and not parse them in these functions):
column_ranks, inv_column_ranks = self._get_numeric_column_ranks(column_ids, row_ids, raw_table)
numeric_relations = self._get_numeric_relations(raw_query, column_ids, row_ids, raw_table)
# Load from model defaults
if return_token_type_ids is None:
return_token_type_ids = "token_type_ids" in self.model_input_names
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
if return_attention_mask:
attention_mask = self.create_attention_mask_from_sequences(query_ids, table_data)
encoded_inputs["attention_mask"] = attention_mask
if answer_coordinates is not None and answer_text is not None:
labels = self.get_answer_ids(column_ids, row_ids, table_data, answer_text, answer_coordinates)
numeric_values = self._get_numeric_values(raw_table, column_ids, row_ids)
numeric_values_scale = self._get_numeric_values_scale(raw_table, column_ids, row_ids)
encoded_inputs["labels"] = labels
encoded_inputs["numeric_values"] = numeric_values
encoded_inputs["numeric_values_scale"] = numeric_values_scale
if return_token_type_ids:
token_type_ids = [
segment_ids,
column_ids,
row_ids,
prev_labels,
column_ranks,
inv_column_ranks,
numeric_relations,
]
token_type_ids = [list(ids) for ids in list(zip(*token_type_ids))]
encoded_inputs["token_type_ids"] = token_type_ids
if return_special_tokens_mask:
if add_special_tokens:
encoded_inputs["special_tokens_mask"] = self.get_special_tokens_mask(query_ids, table_ids)
else:
encoded_inputs["special_tokens_mask"] = [0] * len(input_ids)
# Check lengths
if max_length is None and len(encoded_inputs["input_ids"]) > self.model_max_length and verbose:
if not self.deprecation_warnings.get("sequence-length-is-longer-than-the-specified-maximum", False):
logger.warning(
"Token indices sequence length is longer than the specified maximum sequence length "
f"for this model ({len(encoded_inputs['input_ids'])} > {self.model_max_length}). Running this "
"sequence through the model will result in indexing errors."
)
self.deprecation_warnings["sequence-length-is-longer-than-the-specified-maximum"] = True
# Padding
if padding != PaddingStrategy.DO_NOT_PAD or return_attention_mask:
encoded_inputs = self.pad(
encoded_inputs,
max_length=max_length,
padding=padding.value,
pad_to_multiple_of=pad_to_multiple_of,
padding_side=padding_side,
return_attention_mask=return_attention_mask,
)
if return_length:
encoded_inputs["length"] = len(encoded_inputs["input_ids"])
batch_outputs = BatchEncoding(
encoded_inputs, tensor_type=return_tensors, prepend_batch_axis=prepend_batch_axis
)
return batch_outputs
def _get_truncated_table_rows(
self,
query_tokens: List[str],
tokenized_table: TokenizedTable,
num_rows: int,
num_columns: int,
max_length: int,
truncation_strategy: Union[str, TapasTruncationStrategy],
) -> Tuple[int, int]:
"""
Truncates a sequence pair in-place following the strategy.
Args:
query_tokens (`List[str]`):
List of strings corresponding to the tokenized query.
tokenized_table (`TokenizedTable`):
Tokenized table
num_rows (`int`):
Total number of table rows
num_columns (`int`):
Total number of table columns
max_length (`int`):
Total maximum length.
truncation_strategy (`str` or [`TapasTruncationStrategy]`):
Truncation strategy to use. Seeing as this method should only be called when truncating, the only
available strategy is the `"drop_rows_to_fit"` strategy.
Returns:
`Tuple(int, int)`: tuple containing the number of rows after truncation, and the number of tokens available
for each table element.
"""
if not isinstance(truncation_strategy, TapasTruncationStrategy):
truncation_strategy = TapasTruncationStrategy(truncation_strategy)
if max_length is None:
max_length = self.model_max_length
if truncation_strategy == TapasTruncationStrategy.DROP_ROWS_TO_FIT:
while True:
num_tokens = self._get_max_num_tokens(
query_tokens, tokenized_table, num_rows=num_rows, num_columns=num_columns, max_length=max_length
)
if num_tokens is not None:
# We could fit the table.
break
# Try to drop a row to fit the table.
num_rows -= 1
if num_rows < 1:
break
elif truncation_strategy != TapasTruncationStrategy.DO_NOT_TRUNCATE:
raise ValueError(f"Unknown truncation strategy {truncation_strategy}.")
return num_rows, num_tokens or 1
def _tokenize_table(
self,
table=None,
):
"""
Tokenizes column headers and cell texts of a table.
Args:
table (`pd.Dataframe`):
Table. Returns: `TokenizedTable`: TokenizedTable object.
"""
tokenized_rows = []
tokenized_row = []
# tokenize column headers
for column in table:
if self.strip_column_names:
tokenized_row.append(self.tokenize(""))
else:
tokenized_row.append(self.tokenize(column))
tokenized_rows.append(tokenized_row)
# tokenize cell values
for idx, row in table.iterrows():
tokenized_row = []
for cell in row:
tokenized_row.append(self.tokenize(cell))
tokenized_rows.append(tokenized_row)
token_coordinates = []
for row_index, row in enumerate(tokenized_rows):
for column_index, cell in enumerate(row):
for token_index, _ in enumerate(cell):
token_coordinates.append(
TokenCoordinates(
row_index=row_index,
column_index=column_index,
token_index=token_index,
)
)
return TokenizedTable(
rows=tokenized_rows,
selected_tokens=token_coordinates,
)
def _question_encoding_cost(self, question_tokens):
# Two extra spots of SEP and CLS.
return len(question_tokens) + 2
def _get_token_budget(self, question_tokens, max_length=None):
"""
Computes the number of tokens left for the table after tokenizing a question, taking into account the max
sequence length of the model.
Args:
question_tokens (`List[String]`):
List of question tokens. Returns: `int`: the number of tokens left for the table, given the model max
length.
"""
return (max_length if max_length is not None else self.model_max_length) - self._question_encoding_cost(
question_tokens
)
def _get_table_values(self, table, num_columns, num_rows, num_tokens) -> Generator[TableValue, None, None]:
"""Iterates over partial table and returns token, column and row indexes."""
for tc in table.selected_tokens:
# First row is header row.
if tc.row_index >= num_rows + 1:
continue
if tc.column_index >= num_columns:
continue
cell = table.rows[tc.row_index][tc.column_index]
token = cell[tc.token_index]
word_begin_index = tc.token_index
# Don't add partial words. Find the starting word piece and check if it
# fits in the token budget.
while word_begin_index >= 0 and _is_inner_wordpiece(cell[word_begin_index]):
word_begin_index -= 1
if word_begin_index >= num_tokens:
continue
yield TableValue(token, tc.column_index + 1, tc.row_index)
def _get_table_boundaries(self, table):
"""Return maximal number of rows, columns and tokens."""
max_num_tokens = 0
max_num_columns = 0
max_num_rows = 0
for tc in table.selected_tokens:
max_num_columns = max(max_num_columns, tc.column_index + 1)
max_num_rows = max(max_num_rows, tc.row_index + 1)
max_num_tokens = max(max_num_tokens, tc.token_index + 1)
max_num_columns = min(self.max_column_id, max_num_columns)
max_num_rows = min(self.max_row_id, max_num_rows)
return max_num_rows, max_num_columns, max_num_tokens
def _get_table_cost(self, table, num_columns, num_rows, num_tokens):
return sum(1 for _ in self._get_table_values(table, num_columns, num_rows, num_tokens))
def _get_max_num_tokens(self, question_tokens, tokenized_table, num_columns, num_rows, max_length):
"""Computes max number of tokens that can be squeezed into the budget."""
token_budget = self._get_token_budget(question_tokens, max_length)
_, _, max_num_tokens = self._get_table_boundaries(tokenized_table)
if self.cell_trim_length >= 0 and max_num_tokens > self.cell_trim_length:
max_num_tokens = self.cell_trim_length
num_tokens = 0
for num_tokens in range(max_num_tokens + 1):
cost = self._get_table_cost(tokenized_table, num_columns, num_rows, num_tokens + 1)
if cost > token_budget:
break
if num_tokens < max_num_tokens:
if self.cell_trim_length >= 0:
# We don't allow dynamic trimming if a cell_trim_length is set.
return None
if num_tokens == 0:
return None
return num_tokens
def _get_num_columns(self, table):
num_columns = table.shape[1]
if num_columns >= self.max_column_id:
raise ValueError("Too many columns")
return num_columns
def _get_num_rows(self, table, drop_rows_to_fit):
num_rows = table.shape[0]
if num_rows >= self.max_row_id:
if drop_rows_to_fit:
num_rows = self.max_row_id - 1
else:
raise ValueError("Too many rows")
return num_rows
def _serialize_text(self, question_tokens):
"""Serializes texts in index arrays."""
tokens = []
segment_ids = []
column_ids = []
row_ids = []
# add [CLS] token at the beginning
tokens.append(self.cls_token)
segment_ids.append(0)
column_ids.append(0)
row_ids.append(0)
for token in question_tokens:
tokens.append(token)
segment_ids.append(0)
column_ids.append(0)
row_ids.append(0)
return tokens, segment_ids, column_ids, row_ids
def _serialize(
self,
question_tokens,
table,
num_columns,
num_rows,
num_tokens,
):
"""Serializes table and text."""
tokens, segment_ids, column_ids, row_ids = self._serialize_text(question_tokens)
# add [SEP] token between question and table tokens
tokens.append(self.sep_token)
segment_ids.append(0)
column_ids.append(0)
row_ids.append(0)
for token, column_id, row_id in self._get_table_values(table, num_columns, num_rows, num_tokens):
tokens.append(token)
segment_ids.append(1)
column_ids.append(column_id)
row_ids.append(row_id)
return SerializedExample(
tokens=tokens,
segment_ids=segment_ids,
column_ids=column_ids,
row_ids=row_ids,
)
def _get_column_values(self, table, col_index):
table_numeric_values = {}
for row_index, row in table.iterrows():
cell = row[col_index]
if cell.numeric_value is not None:
table_numeric_values[row_index] = cell.numeric_value
return table_numeric_values
def _get_cell_token_indexes(self, column_ids, row_ids, column_id, row_id):
for index in range(len(column_ids)):
if column_ids[index] - 1 == column_id and row_ids[index] - 1 == row_id:
yield index
def _get_numeric_column_ranks(self, column_ids, row_ids, table):
"""Returns column ranks for all numeric columns."""
ranks = [0] * len(column_ids)
inv_ranks = [0] * len(column_ids)
# original code from tf_example_utils.py of the original implementation
if table is not None:
for col_index in range(len(table.columns)):
table_numeric_values = self._get_column_values(table, col_index)
if not table_numeric_values:
continue
try:
key_fn = get_numeric_sort_key_fn(table_numeric_values.values())
except ValueError:
continue
table_numeric_values = {row_index: key_fn(value) for row_index, value in table_numeric_values.items()}
table_numeric_values_inv = collections.defaultdict(list)
for row_index, value in table_numeric_values.items():
table_numeric_values_inv[value].append(row_index)
unique_values = sorted(table_numeric_values_inv.keys())
for rank, value in enumerate(unique_values):
for row_index in table_numeric_values_inv[value]:
for index in self._get_cell_token_indexes(column_ids, row_ids, col_index, row_index):
ranks[index] = rank + 1
inv_ranks[index] = len(unique_values) - rank
return ranks, inv_ranks
def _get_numeric_sort_key_fn(self, table_numeric_values, value):
"""
Returns the sort key function for comparing value to table values. The function returned will be a suitable
input for the key param of the sort(). See number_annotation_utils._get_numeric_sort_key_fn for details
Args:
table_numeric_values: Numeric values of a column
value: Numeric value in the question
Returns:
A function key function to compare column and question values.
"""
if not table_numeric_values:
return None
all_values = list(table_numeric_values.values())
all_values.append(value)
try:
return get_numeric_sort_key_fn(all_values)
except ValueError:
return None
def _get_numeric_relations(self, question, column_ids, row_ids, table):
"""
Returns numeric relations embeddings
Args:
question: Question object.
column_ids: Maps word piece position to column id.
row_ids: Maps word piece position to row id.
table: The table containing the numeric cell values.
"""
numeric_relations = [0] * len(column_ids)
# first, we add any numeric value spans to the question:
# Create a dictionary that maps a table cell to the set of all relations
# this cell has with any value in the question.
cell_indices_to_relations = collections.defaultdict(set)
if question is not None and table is not None:
for numeric_value_span in question.numeric_spans:
for value in numeric_value_span.values:
for column_index in range(len(table.columns)):
table_numeric_values = self._get_column_values(table, column_index)
sort_key_fn = self._get_numeric_sort_key_fn(table_numeric_values, value)
if sort_key_fn is None:
continue
for row_index, cell_value in table_numeric_values.items():
relation = get_numeric_relation(value, cell_value, sort_key_fn)
if relation is not None:
cell_indices_to_relations[column_index, row_index].add(relation)
# For each cell add a special feature for all its word pieces.
for (column_index, row_index), relations in cell_indices_to_relations.items():
relation_set_index = 0
for relation in relations:
assert relation.value >= Relation.EQ.value
relation_set_index += 2 ** (relation.value - Relation.EQ.value)
for cell_token_index in self._get_cell_token_indexes(column_ids, row_ids, column_index, row_index):
numeric_relations[cell_token_index] = relation_set_index
return numeric_relations
def _get_numeric_values(self, table, column_ids, row_ids):
"""Returns numeric values for computation of answer loss."""
numeric_values = [float("nan")] * len(column_ids)
if table is not None:
num_rows = table.shape[0]
num_columns = table.shape[1]
for col_index in range(num_columns):
for row_index in range(num_rows):
numeric_value = table.iloc[row_index, col_index].numeric_value
if numeric_value is not None:
if numeric_value.float_value is None:
continue
float_value = numeric_value.float_value
if float_value == float("inf"):
continue
for index in self._get_cell_token_indexes(column_ids, row_ids, col_index, row_index):
numeric_values[index] = float_value
return numeric_values
def _get_numeric_values_scale(self, table, column_ids, row_ids):
"""Returns a scale to each token to down weigh the value of long words."""
numeric_values_scale = [1.0] * len(column_ids)
if table is None:
return numeric_values_scale
num_rows = table.shape[0]
num_columns = table.shape[1]
for col_index in range(num_columns):
for row_index in range(num_rows):
indices = list(self._get_cell_token_indexes(column_ids, row_ids, col_index, row_index))
num_indices = len(indices)
if num_indices > 1:
for index in indices:
numeric_values_scale[index] = float(num_indices)
return numeric_values_scale
def _pad_to_seq_length(self, inputs):
while len(inputs) > self.model_max_length:
inputs.pop()
while len(inputs) < self.model_max_length:
inputs.append(0)
def _get_all_answer_ids_from_coordinates(
self,
column_ids,
row_ids,
answers_list,
):
"""Maps lists of answer coordinates to token indexes."""
answer_ids = [0] * len(column_ids)
found_answers = set()
all_answers = set()
for answers in answers_list:
column_index, row_index = answers
all_answers.add((column_index, row_index))
for index in self._get_cell_token_indexes(column_ids, row_ids, column_index, row_index):
found_answers.add((column_index, row_index))
answer_ids[index] = 1
missing_count = len(all_answers) - len(found_answers)
return answer_ids, missing_count
def _get_all_answer_ids(self, column_ids, row_ids, answer_coordinates):
"""
Maps answer coordinates of a question to token indexes.
In the SQA format (TSV), the coordinates are given as (row, column) tuples. Here, we first swap them to
(column, row) format before calling _get_all_answer_ids_from_coordinates.
"""
def _to_coordinates(answer_coordinates_question):
return [(coords[1], coords[0]) for coords in answer_coordinates_question]
return self._get_all_answer_ids_from_coordinates(
column_ids, row_ids, answers_list=(_to_coordinates(answer_coordinates))
)
def _find_tokens(self, text, segment):
"""Return start index of segment in text or None."""
logging.info(f"text: {text} {segment}")
for index in range(1 + len(text) - len(segment)):
for seg_index, seg_token in enumerate(segment):
if text[index + seg_index].piece != seg_token.piece:
break
else:
return index
return None
def _find_answer_coordinates_from_answer_text(
self,
tokenized_table,
answer_text,
):
"""Returns all occurrences of answer_text in the table."""
logging.info(f"answer text: {answer_text}")
for row_index, row in enumerate(tokenized_table.rows):
if row_index == 0:
# We don't search for answers in the header.
continue
for col_index, cell in enumerate(row):
token_index = self._find_tokens(cell, answer_text)
if token_index is not None:
yield TokenCoordinates(
row_index=row_index,
column_index=col_index,
token_index=token_index,
)
def _find_answer_ids_from_answer_texts(
self,
column_ids,
row_ids,
tokenized_table,
answer_texts,
):
"""Maps question with answer texts to the first matching token indexes."""
answer_ids = [0] * len(column_ids)
for answer_text in answer_texts:
for coordinates in self._find_answer_coordinates_from_answer_text(
tokenized_table,
answer_text,
):
# Maps answer coordinates to indexes this can fail if tokens / rows have
# been pruned.
indexes = list(
self._get_cell_token_indexes(
column_ids,
row_ids,
column_id=coordinates.column_index,
row_id=coordinates.row_index - 1,
)
)
indexes.sort()
coordinate_answer_ids = []
if indexes:
begin_index = coordinates.token_index + indexes[0]
end_index = begin_index + len(answer_text)
for index in indexes:
if index >= begin_index and index < end_index:
coordinate_answer_ids.append(index)
if len(coordinate_answer_ids) == len(answer_text):
for index in coordinate_answer_ids:
answer_ids[index] = 1
break
return answer_ids
def _get_answer_ids(self, column_ids, row_ids, answer_coordinates):
"""Maps answer coordinates of a question to token indexes."""
answer_ids, missing_count = self._get_all_answer_ids(column_ids, row_ids, answer_coordinates)
if missing_count:
raise ValueError("Couldn't find all answers")
return answer_ids
def get_answer_ids(self, column_ids, row_ids, tokenized_table, answer_texts_question, answer_coordinates_question):
if self.update_answer_coordinates:
return self._find_answer_ids_from_answer_texts(
column_ids,
row_ids,
tokenized_table,
answer_texts=[self.tokenize(at) for at in answer_texts_question],
)
return self._get_answer_ids(column_ids, row_ids, answer_coordinates_question)
def _pad(
self,
encoded_inputs: Union[Dict[str, EncodedInput], BatchEncoding],
max_length: Optional[int] = None,
padding_strategy: PaddingStrategy = PaddingStrategy.DO_NOT_PAD,
pad_to_multiple_of: Optional[int] = None,
padding_side: Optional[bool] = None,
return_attention_mask: Optional[bool] = None,
) -> dict:
"""
Pad encoded inputs (on left/right and up to predefined length or max length in the batch)
Args:
encoded_inputs:
Dictionary of tokenized inputs (`List[int]`) or batch of tokenized inputs (`List[List[int]]`).
max_length: maximum length of the returned list and optionally padding length (see below).
Will truncate by taking into account the special tokens.
padding_strategy: PaddingStrategy to use for padding.
- PaddingStrategy.LONGEST Pad to the longest sequence in the batch
- PaddingStrategy.MAX_LENGTH: Pad to the max length (default)
- PaddingStrategy.DO_NOT_PAD: Do not pad
The tokenizer padding sides are defined in self.padding_side:
- 'left': pads on the left of the sequences
- 'right': pads on the right of the sequences
pad_to_multiple_of: (optional) Integer if set will pad the sequence to a multiple of the provided value.
This is especially useful to enable the use of Tensor Core on NVIDIA hardware with compute capability
`>= 7.5` (Volta).
padding_side:
The side on which the model should have padding applied. Should be selected between ['right', 'left'].
Default value is picked from the class attribute of the same name.
return_attention_mask:
(optional) Set to False to avoid returning attention mask (default: set to model specifics)
"""
# Load from model defaults
if return_attention_mask is None:
return_attention_mask = "attention_mask" in self.model_input_names
if padding_strategy == PaddingStrategy.LONGEST:
max_length = len(encoded_inputs["input_ids"])
if max_length is not None and pad_to_multiple_of is not None and (max_length % pad_to_multiple_of != 0):
max_length = ((max_length // pad_to_multiple_of) + 1) * pad_to_multiple_of
needs_to_be_padded = (
padding_strategy != PaddingStrategy.DO_NOT_PAD and len(encoded_inputs["input_ids"]) != max_length
)
# Initialize attention mask if not present.
if return_attention_mask and "attention_mask" not in encoded_inputs:
encoded_inputs["attention_mask"] = [1] * len(encoded_inputs["input_ids"])
if needs_to_be_padded:
difference = max_length - len(encoded_inputs["input_ids"])
padding_side = padding_side if padding_side is not None else self.padding_side
if padding_side == "right":
if return_attention_mask:
encoded_inputs["attention_mask"] = encoded_inputs["attention_mask"] + [0] * difference
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = (
encoded_inputs["token_type_ids"] + [[self.pad_token_type_id] * 7] * difference
)
if "labels" in encoded_inputs:
encoded_inputs["labels"] = encoded_inputs["labels"] + [0] * difference
if "numeric_values" in encoded_inputs:
encoded_inputs["numeric_values"] = encoded_inputs["numeric_values"] + [float("nan")] * difference
if "numeric_values_scale" in encoded_inputs:
encoded_inputs["numeric_values_scale"] = (
encoded_inputs["numeric_values_scale"] + [1.0] * difference
)
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = encoded_inputs["special_tokens_mask"] + [1] * difference
encoded_inputs["input_ids"] = encoded_inputs["input_ids"] + [self.pad_token_id] * difference
elif padding_side == "left":
if return_attention_mask:
encoded_inputs["attention_mask"] = [0] * difference + encoded_inputs["attention_mask"]
if "token_type_ids" in encoded_inputs:
encoded_inputs["token_type_ids"] = [[self.pad_token_type_id] * 7] * difference + encoded_inputs[
"token_type_ids"
]
if "labels" in encoded_inputs:
encoded_inputs["labels"] = [0] * difference + encoded_inputs["labels"]
if "numeric_values" in encoded_inputs:
encoded_inputs["numeric_values"] = [float("nan")] * difference + encoded_inputs["numeric_values"]
if "numeric_values_scale" in encoded_inputs:
encoded_inputs["numeric_values_scale"] = [1.0] * difference + encoded_inputs[
"numeric_values_scale"
]
if "special_tokens_mask" in encoded_inputs:
encoded_inputs["special_tokens_mask"] = [1] * difference + encoded_inputs["special_tokens_mask"]
encoded_inputs["input_ids"] = [self.pad_token_id] * difference + encoded_inputs["input_ids"]
else:
raise ValueError("Invalid padding strategy:" + str(padding_side))
return encoded_inputs
# Everything related to converting logits to predictions
def _get_cell_token_probs(self, probabilities, segment_ids, row_ids, column_ids):
for i, p in enumerate(probabilities):
segment_id = segment_ids[i]
col = column_ids[i] - 1
row = row_ids[i] - 1
if col >= 0 and row >= 0 and segment_id == 1:
yield i, p
def _get_mean_cell_probs(self, probabilities, segment_ids, row_ids, column_ids):
"""Computes average probability per cell, aggregating over tokens."""
coords_to_probs = collections.defaultdict(list)
for i, prob in self._get_cell_token_probs(probabilities, segment_ids, row_ids, column_ids):
col = column_ids[i] - 1
row = row_ids[i] - 1
coords_to_probs[(col, row)].append(prob)
return {coords: np.array(cell_probs).mean() for coords, cell_probs in coords_to_probs.items()}
def convert_logits_to_predictions(self, data, logits, logits_agg=None, cell_classification_threshold=0.5):
"""
Converts logits of [`TapasForQuestionAnswering`] to actual predicted answer coordinates and optional
aggregation indices.
The original implementation, on which this function is based, can be found
[here](https://github.com/google-research/tapas/blob/4908213eb4df7aa988573350278b44c4dbe3f71b/tapas/experiments/prediction_utils.py#L288).
Args:
data (`dict`):
Dictionary mapping features to actual values. Should be created using [`TapasTokenizer`].
logits (`torch.Tensor` or `tf.Tensor` of shape `(batch_size, sequence_length)`):
Tensor containing the logits at the token level.
logits_agg (`torch.Tensor` or `tf.Tensor` of shape `(batch_size, num_aggregation_labels)`, *optional*):
Tensor containing the aggregation logits.
cell_classification_threshold (`float`, *optional*, defaults to 0.5):
Threshold to be used for cell selection. All table cells for which their probability is larger than
this threshold will be selected.
Returns:
`tuple` comprising various elements depending on the inputs:
- predicted_answer_coordinates (`List[List[[tuple]]` of length `batch_size`): Predicted answer coordinates
as a list of lists of tuples. Each element in the list contains the predicted answer coordinates of a
single example in the batch, as a list of tuples. Each tuple is a cell, i.e. (row index, column index).
- predicted_aggregation_indices (`List[int]`of length `batch_size`, *optional*, returned when
`logits_aggregation` is provided): Predicted aggregation operator indices of the aggregation head.
"""
# converting to numpy arrays to work with PT/TF
logits = logits.numpy()
if logits_agg is not None:
logits_agg = logits_agg.numpy()
data = {key: value.numpy() for key, value in data.items() if key != "training"}
# input data is of type float32
# np.log(np.finfo(np.float32).max) = 88.72284
# Any value over 88.72284 will overflow when passed through the exponential, sending a warning
# We disable this warning by truncating the logits.
logits[logits < -88.7] = -88.7
# Compute probabilities from token logits
probabilities = 1 / (1 + np.exp(-logits)) * data["attention_mask"]
token_types = [
"segment_ids",
"column_ids",
"row_ids",
"prev_labels",
"column_ranks",
"inv_column_ranks",
"numeric_relations",
]
# collect input_ids, segment ids, row ids and column ids of batch. Shape (batch_size, seq_len)
input_ids = data["input_ids"]
segment_ids = data["token_type_ids"][:, :, token_types.index("segment_ids")]
row_ids = data["token_type_ids"][:, :, token_types.index("row_ids")]
column_ids = data["token_type_ids"][:, :, token_types.index("column_ids")]
# next, get answer coordinates for every example in the batch
num_batch = input_ids.shape[0]
predicted_answer_coordinates = []
for i in range(num_batch):
probabilities_example = probabilities[i].tolist()
segment_ids_example = segment_ids[i]
row_ids_example = row_ids[i]
column_ids_example = column_ids[i]
max_width = column_ids_example.max()
max_height = row_ids_example.max()
if max_width == 0 and max_height == 0:
continue
cell_coords_to_prob = self._get_mean_cell_probs(
probabilities_example,
segment_ids_example.tolist(),
row_ids_example.tolist(),
column_ids_example.tolist(),
)
# Select the answers above the classification threshold.
answer_coordinates = []
for col in range(max_width):
for row in range(max_height):
cell_prob = cell_coords_to_prob.get((col, row), None)
if cell_prob is not None:
if cell_prob > cell_classification_threshold:
answer_coordinates.append((row, col))
answer_coordinates = sorted(answer_coordinates)
predicted_answer_coordinates.append(answer_coordinates)
output = (predicted_answer_coordinates,)
if logits_agg is not None:
predicted_aggregation_indices = logits_agg.argmax(axis=-1)
output = (predicted_answer_coordinates, predicted_aggregation_indices.tolist())
return output
# End of everything related to converting logits to predictions
|
class_definition
| 5,907 | 89,933 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,338 |
class BasicTokenizer:
"""
Constructs a BasicTokenizer that will run basic tokenization (punctuation splitting, lower casing, etc.).
Args:
do_lower_case (`bool`, *optional*, defaults to `True`):
Whether or not to lowercase the input when tokenizing.
never_split (`Iterable`, *optional*):
Collection of tokens which will never be split during tokenization. Only has an effect when
`do_basic_tokenize=True`
tokenize_chinese_chars (`bool`, *optional*, defaults to `True`):
Whether or not to tokenize Chinese characters.
This should likely be deactivated for Japanese (see this
[issue](https://github.com/huggingface/transformers/issues/328)).
strip_accents (`bool`, *optional*):
Whether or not to strip all accents. If this option is not specified, then it will be determined by the
value for `lowercase` (as in the original BERT).
do_split_on_punc (`bool`, *optional*, defaults to `True`):
In some instances we want to skip the basic punctuation splitting so that later tokenization can capture
the full context of the words, such as contractions.
"""
def __init__(
self,
do_lower_case=True,
never_split=None,
tokenize_chinese_chars=True,
strip_accents=None,
do_split_on_punc=True,
):
if never_split is None:
never_split = []
self.do_lower_case = do_lower_case
self.never_split = set(never_split)
self.tokenize_chinese_chars = tokenize_chinese_chars
self.strip_accents = strip_accents
self.do_split_on_punc = do_split_on_punc
def tokenize(self, text, never_split=None):
"""
Basic Tokenization of a piece of text. For sub-word tokenization, see WordPieceTokenizer.
Args:
never_split (`List[str]`, *optional*)
Kept for backward compatibility purposes. Now implemented directly at the base class level (see
[`PreTrainedTokenizer.tokenize`]) List of token not to split.
"""
# union() returns a new set by concatenating the two sets.
never_split = self.never_split.union(set(never_split)) if never_split else self.never_split
text = self._clean_text(text)
# This was added on November 1st, 2018 for the multilingual and Chinese
# models. This is also applied to the English models now, but it doesn't
# matter since the English models were not trained on any Chinese data
# and generally don't have any Chinese data in them (there are Chinese
# characters in the vocabulary because Wikipedia does have some Chinese
# words in the English Wikipedia.).
if self.tokenize_chinese_chars:
text = self._tokenize_chinese_chars(text)
# prevents treating the same character with different unicode codepoints as different characters
unicode_normalized_text = unicodedata.normalize("NFC", text)
orig_tokens = whitespace_tokenize(unicode_normalized_text)
split_tokens = []
for token in orig_tokens:
if token not in never_split:
if self.do_lower_case:
token = token.lower()
if self.strip_accents is not False:
token = self._run_strip_accents(token)
elif self.strip_accents:
token = self._run_strip_accents(token)
split_tokens.extend(self._run_split_on_punc(token, never_split))
output_tokens = whitespace_tokenize(" ".join(split_tokens))
return output_tokens
def _run_strip_accents(self, text):
"""Strips accents from a piece of text."""
text = unicodedata.normalize("NFD", text)
output = []
for char in text:
cat = unicodedata.category(char)
if cat == "Mn":
continue
output.append(char)
return "".join(output)
def _run_split_on_punc(self, text, never_split=None):
"""Splits punctuation on a piece of text."""
if not self.do_split_on_punc or (never_split is not None and text in never_split):
return [text]
chars = list(text)
i = 0
start_new_word = True
output = []
while i < len(chars):
char = chars[i]
if _is_punctuation(char):
output.append([char])
start_new_word = True
else:
if start_new_word:
output.append([])
start_new_word = False
output[-1].append(char)
i += 1
return ["".join(x) for x in output]
def _tokenize_chinese_chars(self, text):
"""Adds whitespace around any CJK character."""
output = []
for char in text:
cp = ord(char)
if self._is_chinese_char(cp):
output.append(" ")
output.append(char)
output.append(" ")
else:
output.append(char)
return "".join(output)
def _is_chinese_char(self, cp):
"""Checks whether CP is the codepoint of a CJK character."""
# This defines a "chinese character" as anything in the CJK Unicode block:
# https://en.wikipedia.org/wiki/CJK_Unified_Ideographs_(Unicode_block)
#
# Note that the CJK Unicode block is NOT all Japanese and Korean characters,
# despite its name. The modern Korean Hangul alphabet is a different block,
# as is Japanese Hiragana and Katakana. Those alphabets are used to write
# space-separated words, so they are not treated specially and handled
# like the all of the other languages.
if (
(cp >= 0x4E00 and cp <= 0x9FFF)
or (cp >= 0x3400 and cp <= 0x4DBF) #
or (cp >= 0x20000 and cp <= 0x2A6DF) #
or (cp >= 0x2A700 and cp <= 0x2B73F) #
or (cp >= 0x2B740 and cp <= 0x2B81F) #
or (cp >= 0x2B820 and cp <= 0x2CEAF) #
or (cp >= 0xF900 and cp <= 0xFAFF)
or (cp >= 0x2F800 and cp <= 0x2FA1F) #
): #
return True
return False
def _clean_text(self, text):
"""Performs invalid character removal and whitespace cleanup on text."""
output = []
for char in text:
cp = ord(char)
if cp == 0 or cp == 0xFFFD or _is_control(char):
continue
if _is_whitespace(char):
output.append(" ")
else:
output.append(char)
return "".join(output)
|
class_definition
| 90,008 | 96,756 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,339 |
class WordpieceTokenizer:
"""Runs WordPiece tokenization."""
def __init__(self, vocab, unk_token, max_input_chars_per_word=100):
self.vocab = vocab
self.unk_token = unk_token
self.max_input_chars_per_word = max_input_chars_per_word
def tokenize(self, text):
"""
Tokenizes a piece of text into its word pieces. This uses a greedy longest-match-first algorithm to perform
tokenization using the given vocabulary.
For example, `input = "unaffable"` wil return as output `["un", "##aff", "##able"]`.
Args:
text: A single token or whitespace separated tokens. This should have
already been passed through *BasicTokenizer*.
Returns:
A list of wordpiece tokens.
"""
output_tokens = []
for token in whitespace_tokenize(text):
chars = list(token)
if len(chars) > self.max_input_chars_per_word:
output_tokens.append(self.unk_token)
continue
is_bad = False
start = 0
sub_tokens = []
while start < len(chars):
end = len(chars)
cur_substr = None
while start < end:
substr = "".join(chars[start:end])
if start > 0:
substr = "##" + substr
if substr in self.vocab:
cur_substr = substr
break
end -= 1
if cur_substr is None:
is_bad = True
break
sub_tokens.append(cur_substr)
start = end
if is_bad:
output_tokens.append(self.unk_token)
else:
output_tokens.extend(sub_tokens)
return output_tokens
|
class_definition
| 96,835 | 98,723 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,340 |
class Relation(enum.Enum):
HEADER_TO_CELL = 1 # Connects header to cell.
CELL_TO_HEADER = 2 # Connects cell to header.
QUERY_TO_HEADER = 3 # Connects query to headers.
QUERY_TO_CELL = 4 # Connects query to cells.
ROW_TO_CELL = 5 # Connects row to cells.
CELL_TO_ROW = 6 # Connects cells to row.
EQ = 7 # Annotation value is same as cell value
LT = 8 # Annotation value is less than cell value
GT = 9 # Annotation value is greater than cell value
|
class_definition
| 99,320 | 99,810 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,341 |
class Date:
year: Optional[int] = None
month: Optional[int] = None
day: Optional[int] = None
|
class_definition
| 99,824 | 99,928 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,342 |
class NumericValue:
float_value: Optional[float] = None
date: Optional[Date] = None
|
class_definition
| 99,942 | 100,033 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,343 |
class NumericValueSpan:
begin_index: int = None
end_index: int = None
values: List[NumericValue] = None
|
class_definition
| 100,047 | 100,162 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,344 |
class Cell:
text: str
numeric_value: Optional[NumericValue] = None
|
class_definition
| 100,176 | 100,250 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,345 |
class Question:
original_text: str # The original raw question string.
text: str # The question string after normalization.
numeric_spans: Optional[List[NumericValueSpan]] = None
|
class_definition
| 100,264 | 100,456 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/tokenization_tapas.py
| null | 5,346 |
class TapasConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`TapasModel`]. It is used to instantiate a TAPAS
model according to the specified arguments, defining the model architecture. Instantiating a configuration with the
defaults will yield a similar configuration to that of the TAPAS
[google/tapas-base-finetuned-sqa](https://huggingface.co/google/tapas-base-finetuned-sqa) architecture.
Configuration objects inherit from [`PreTrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Hyperparameters additional to BERT are taken from run_task_main.py and hparam_utils.py of the original
implementation. Original implementation available at https://github.com/google-research/tapas/tree/master.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the TAPAS model. Defines the number of different tokens that can be represented by the
`inputs_ids` passed when calling [`TapasModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `Callable`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"swish"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 1024):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_sizes (`List[int]`, *optional*, defaults to `[3, 256, 256, 2, 256, 256, 10]`):
The vocabulary sizes of the `token_type_ids` passed when calling [`TapasModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
positive_label_weight (`float`, *optional*, defaults to 10.0):
Weight for positive labels.
num_aggregation_labels (`int`, *optional*, defaults to 0):
The number of aggregation operators to predict.
aggregation_loss_weight (`float`, *optional*, defaults to 1.0):
Importance weight for the aggregation loss.
use_answer_as_supervision (`bool`, *optional*):
Whether to use the answer as the only supervision for aggregation examples.
answer_loss_importance (`float`, *optional*, defaults to 1.0):
Importance weight for the regression loss.
use_normalized_answer_loss (`bool`, *optional*, defaults to `False`):
Whether to normalize the answer loss by the maximum of the predicted and expected value.
huber_loss_delta (`float`, *optional*):
Delta parameter used to calculate the regression loss.
temperature (`float`, *optional*, defaults to 1.0):
Value used to control (OR change) the skewness of cell logits probabilities.
aggregation_temperature (`float`, *optional*, defaults to 1.0):
Scales aggregation logits to control the skewness of probabilities.
use_gumbel_for_cells (`bool`, *optional*, defaults to `False`):
Whether to apply Gumbel-Softmax to cell selection.
use_gumbel_for_aggregation (`bool`, *optional*, defaults to `False`):
Whether to apply Gumbel-Softmax to aggregation selection.
average_approximation_function (`string`, *optional*, defaults to `"ratio"`):
Method to calculate the expected average of cells in the weak supervision case. One of `"ratio"`,
`"first_order"` or `"second_order"`.
cell_selection_preference (`float`, *optional*):
Preference for cell selection in ambiguous cases. Only applicable in case of weak supervision for
aggregation (WTQ, WikiSQL). If the total mass of the aggregation probabilities (excluding the "NONE"
operator) is higher than this hyperparameter, then aggregation is predicted for an example.
answer_loss_cutoff (`float`, *optional*):
Ignore examples with answer loss larger than cutoff.
max_num_rows (`int`, *optional*, defaults to 64):
Maximum number of rows.
max_num_columns (`int`, *optional*, defaults to 32):
Maximum number of columns.
average_logits_per_cell (`bool`, *optional*, defaults to `False`):
Whether to average logits per cell.
select_one_column (`bool`, *optional*, defaults to `True`):
Whether to constrain the model to only select cells from a single column.
allow_empty_column_selection (`bool`, *optional*, defaults to `False`):
Whether to allow not to select any column.
init_cell_selection_weights_to_zero (`bool`, *optional*, defaults to `False`):
Whether to initialize cell selection weights to 0 so that the initial probabilities are 50%.
reset_position_index_per_cell (`bool`, *optional*, defaults to `True`):
Whether to restart position indexes at every cell (i.e. use relative position embeddings).
disable_per_token_loss (`bool`, *optional*, defaults to `False`):
Whether to disable any (strong or weak) supervision on cells.
aggregation_labels (`Dict[int, label]`, *optional*):
The aggregation labels used to aggregate the results. For example, the WTQ models have the following
aggregation labels: `{0: "NONE", 1: "SUM", 2: "AVERAGE", 3: "COUNT"}`
no_aggregation_label_index (`int`, *optional*):
If the aggregation labels are defined and one of these labels represents "No aggregation", this should be
set to its index. For example, the WTQ models have the "NONE" aggregation label at index 0, so that value
should be set to 0 for these models.
Example:
```python
>>> from transformers import TapasModel, TapasConfig
>>> # Initializing a default (SQA) Tapas configuration
>>> configuration = TapasConfig()
>>> # Initializing a model from the configuration
>>> model = TapasModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "tapas"
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=1024,
type_vocab_sizes=[3, 256, 256, 2, 256, 256, 10],
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=0,
positive_label_weight=10.0,
num_aggregation_labels=0,
aggregation_loss_weight=1.0,
use_answer_as_supervision=None,
answer_loss_importance=1.0,
use_normalized_answer_loss=False,
huber_loss_delta=None,
temperature=1.0,
aggregation_temperature=1.0,
use_gumbel_for_cells=False,
use_gumbel_for_aggregation=False,
average_approximation_function="ratio",
cell_selection_preference=None,
answer_loss_cutoff=None,
max_num_rows=64,
max_num_columns=32,
average_logits_per_cell=False,
select_one_column=True,
allow_empty_column_selection=False,
init_cell_selection_weights_to_zero=False,
reset_position_index_per_cell=True,
disable_per_token_loss=False,
aggregation_labels=None,
no_aggregation_label_index=None,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, **kwargs)
# BERT hyperparameters (with updated max_position_embeddings and type_vocab_sizes)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_sizes = type_vocab_sizes
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
# Fine-tuning task hyperparameters
self.positive_label_weight = positive_label_weight
self.num_aggregation_labels = num_aggregation_labels
self.aggregation_loss_weight = aggregation_loss_weight
self.use_answer_as_supervision = use_answer_as_supervision
self.answer_loss_importance = answer_loss_importance
self.use_normalized_answer_loss = use_normalized_answer_loss
self.huber_loss_delta = huber_loss_delta
self.temperature = temperature
self.aggregation_temperature = aggregation_temperature
self.use_gumbel_for_cells = use_gumbel_for_cells
self.use_gumbel_for_aggregation = use_gumbel_for_aggregation
self.average_approximation_function = average_approximation_function
self.cell_selection_preference = cell_selection_preference
self.answer_loss_cutoff = answer_loss_cutoff
self.max_num_rows = max_num_rows
self.max_num_columns = max_num_columns
self.average_logits_per_cell = average_logits_per_cell
self.select_one_column = select_one_column
self.allow_empty_column_selection = allow_empty_column_selection
self.init_cell_selection_weights_to_zero = init_cell_selection_weights_to_zero
self.reset_position_index_per_cell = reset_position_index_per_cell
self.disable_per_token_loss = disable_per_token_loss
# Aggregation hyperparameters
self.aggregation_labels = aggregation_labels
self.no_aggregation_label_index = no_aggregation_label_index
if isinstance(self.aggregation_labels, dict):
self.aggregation_labels = {int(k): v for k, v in aggregation_labels.items()}
|
class_definition
| 1,034 | 12,264 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/tapas/configuration_tapas.py
| null | 5,347 |
class Data2VecTextConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`Data2VecTextModel`] and [`Data2VecTextModel`]. It
is used to instantiate a Data2VecText model according to the specified arguments, defining the model architecture.
Instantiating a configuration with the defaults will yield a similar configuration to that of the Data2VecText
[facebook/data2vec-text-base](https://huggingface.co/facebook/data2vec-text-base) architecture.
Configuration objects inherit from [`PretrainedConfig`] and can be used to control the model outputs. Read the
documentation from [`PretrainedConfig`] for more information.
Args:
vocab_size (`int`, *optional*, defaults to 30522):
Vocabulary size of the DATA2VEC model. Defines the number of different tokens that can be represented by
the `inputs_ids` passed when calling [`Data2VecModel`].
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (often named feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `Callable`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"silu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.1):
The dropout ratio for the attention probabilities.
max_position_embeddings (`int`, *optional*, defaults to 512):
The maximum sequence length that this model might ever be used with. Typically set this to something large
just in case (e.g., 512 or 1024 or 2048).
type_vocab_size (`int`, *optional*, defaults to 2):
The vocabulary size of the `token_type_ids` passed when calling [`Data2VecModel`].
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
position_embedding_type (`str`, *optional*, defaults to `"absolute"`):
Type of position embedding. Choose one of `"absolute"`, `"relative_key"`, `"relative_key_query"`. For
positional embeddings use `"absolute"`. For more information on `"relative_key"`, please refer to
[Self-Attention with Relative Position Representations (Shaw et al.)](https://arxiv.org/abs/1803.02155).
For more information on `"relative_key_query"`, please refer to *Method 4* in [Improve Transformer Models
with Better Relative Position Embeddings (Huang et al.)](https://arxiv.org/abs/2009.13658).
is_decoder (`bool`, *optional*, defaults to `False`):
Whether the model is used as a decoder or not. If `False`, the model is used as an encoder.
use_cache (`bool`, *optional*, defaults to `True`):
Whether or not the model should return the last key/values attentions (not used by all models). Only
relevant if `config.is_decoder=True`.
classifier_dropout (`float`, *optional*):
The dropout ratio for the classification head.
Examples:
```python
>>> from transformers import Data2VecTextConfig, Data2VecTextModel
>>> # Initializing a Data2VecText facebook/data2vec-text-base style configuration
>>> configuration = Data2VecTextConfig()
>>> # Initializing a model (with random weights) from the facebook/data2vec-text-base style configuration
>>> model = Data2VecTextModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "data2vec-text"
def __init__(
self,
vocab_size=30522,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.1,
attention_probs_dropout_prob=0.1,
max_position_embeddings=512,
type_vocab_size=2,
initializer_range=0.02,
layer_norm_eps=1e-12,
pad_token_id=1,
bos_token_id=0,
eos_token_id=2,
position_embedding_type="absolute",
use_cache=True,
classifier_dropout=None,
**kwargs,
):
super().__init__(pad_token_id=pad_token_id, bos_token_id=bos_token_id, eos_token_id=eos_token_id, **kwargs)
self.vocab_size = vocab_size
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.hidden_act = hidden_act
self.intermediate_size = intermediate_size
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.max_position_embeddings = max_position_embeddings
self.type_vocab_size = type_vocab_size
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.position_embedding_type = position_embedding_type
self.use_cache = use_cache
self.classifier_dropout = classifier_dropout
|
class_definition
| 878 | 6,818 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/configuration_data2vec_text.py
| null | 5,348 |
class Data2VecTextOnnxConfig(OnnxConfig):
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
if self.task == "multiple-choice":
dynamic_axis = {0: "batch", 1: "choice", 2: "sequence"}
else:
dynamic_axis = {0: "batch", 1: "sequence"}
return OrderedDict(
[
("input_ids", dynamic_axis),
("attention_mask", dynamic_axis),
]
)
|
class_definition
| 6,821 | 7,274 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/configuration_data2vec_text.py
| null | 5,349 |
class Data2VecVisionModelOutputWithPooling(BaseModelOutputWithPooling):
"""
Class for outputs of [`Data2VecVisionModel`].
Args:
last_hidden_state (`torch.FloatTensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`torch.FloatTensor` of shape `(batch_size, hidden_size)`):
Average of the last layer hidden states of the patch tokens (excluding the *[CLS]* token) if
*config.use_mean_pooling* is set to True. If set to False, then the final hidden state of the *[CLS]* token
will be returned.
hidden_states (`tuple(torch.FloatTensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `torch.FloatTensor` (one for the output of the embeddings + one for the output of each layer) of
shape `(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(torch.FloatTensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `torch.FloatTensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
|
class_definition
| 1,972 | 3,524 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,350 |
class Data2VecVisionDropPath(nn.Module):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks)."""
def __init__(self, drop_prob: Optional[float] = None) -> None:
super().__init__()
self.drop_prob = drop_prob
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
return drop_path(hidden_states, self.drop_prob, self.training)
def extra_repr(self) -> str:
return "p={}".format(self.drop_prob)
|
class_definition
| 4,774 | 5,262 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,351 |
class Data2VecVisionEmbeddings(nn.Module):
"""
Construct the CLS token, position and patch embeddings. Optionally, also the mask token.
"""
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__()
self.cls_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
if config.use_mask_token:
self.mask_token = nn.Parameter(torch.zeros(1, 1, config.hidden_size))
else:
self.mask_token = None
self.patch_embeddings = Data2VecVisionPatchEmbeddings(config)
self.patch_size = config.patch_size
self.image_size = (
config.image_size
if isinstance(config.image_size, collections.abc.Iterable)
else (config.image_size, config.image_size)
)
num_patches = self.patch_embeddings.num_patches
if config.use_absolute_position_embeddings:
self.position_embeddings = nn.Parameter(torch.zeros(1, num_patches + 1, config.hidden_size))
else:
self.position_embeddings = None
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# Copied from transformers.models.vit.modeling_vit.ViTEmbeddings.interpolate_pos_encoding
def interpolate_pos_encoding(self, embeddings: torch.Tensor, height: int, width: int) -> torch.Tensor:
"""
This method allows to interpolate the pre-trained position encodings, to be able to use the model on higher resolution
images. This method is also adapted to support torch.jit tracing.
Adapted from:
- https://github.com/facebookresearch/dino/blob/de9ee3df6cf39fac952ab558447af1fa1365362a/vision_transformer.py#L174-L194, and
- https://github.com/facebookresearch/dinov2/blob/e1277af2ba9496fbadf7aec6eba56e8d882d1e35/dinov2/models/vision_transformer.py#L179-L211
"""
num_patches = embeddings.shape[1] - 1
num_positions = self.position_embeddings.shape[1] - 1
# always interpolate when tracing to ensure the exported model works for dynamic input shapes
if not torch.jit.is_tracing() and num_patches == num_positions and height == width:
return self.position_embeddings
class_pos_embed = self.position_embeddings[:, :1]
patch_pos_embed = self.position_embeddings[:, 1:]
dim = embeddings.shape[-1]
new_height = height // self.patch_size
new_width = width // self.patch_size
sqrt_num_positions = torch_int(num_positions**0.5)
patch_pos_embed = patch_pos_embed.reshape(1, sqrt_num_positions, sqrt_num_positions, dim)
patch_pos_embed = patch_pos_embed.permute(0, 3, 1, 2)
patch_pos_embed = nn.functional.interpolate(
patch_pos_embed,
size=(new_height, new_width),
mode="bicubic",
align_corners=False,
)
patch_pos_embed = patch_pos_embed.permute(0, 2, 3, 1).view(1, -1, dim)
return torch.cat((class_pos_embed, patch_pos_embed), dim=1)
def forward(
self,
pixel_values: torch.Tensor,
bool_masked_pos: Optional[torch.BoolTensor] = None,
interpolate_pos_encoding: bool = False,
) -> torch.Tensor:
_, _, height, width = pixel_values.shape
embeddings, (patch_height, patch_width) = self.patch_embeddings(
pixel_values, self.position_embeddings[:, 1:, :] if self.position_embeddings is not None else None
)
batch_size, seq_len, _ = embeddings.size()
if bool_masked_pos is not None:
mask_tokens = self.mask_token.expand(batch_size, seq_len, -1)
# replace the masked visual tokens by mask_tokens
w = bool_masked_pos.unsqueeze(-1).type_as(mask_tokens)
embeddings = embeddings * (1 - w) + mask_tokens * w
cls_tokens = self.cls_token.expand(batch_size, -1, -1)
if self.position_embeddings is not None:
if interpolate_pos_encoding:
cls_tokens = cls_tokens + self.interpolate_pos_encoding(embeddings, height, width)
else:
cls_tokens = cls_tokens + self.position_embeddings[:, :1, :]
embeddings = torch.cat((cls_tokens, embeddings), dim=1)
embeddings = self.dropout(embeddings)
return embeddings, (patch_height, patch_width)
|
class_definition
| 5,359 | 9,691 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,352 |
class Data2VecVisionPatchEmbeddings(nn.Module):
"""
This class turns `pixel_values` of shape `(batch_size, num_channels, height, width)` into the initial
`hidden_states` (patch embeddings) of shape `(batch_size, seq_length, hidden_size)` to be consumed by a
Transformer.
"""
def __init__(self, config):
super().__init__()
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
patch_shape = (image_size[0] // patch_size[0], image_size[1] // patch_size[1])
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.num_patches = num_patches
self.patch_shape = patch_shape
self.projection = nn.Conv2d(num_channels, hidden_size, kernel_size=patch_size, stride=patch_size)
def forward(
self,
pixel_values: torch.Tensor,
position_embedding: Optional[torch.Tensor] = None,
) -> torch.Tensor:
batch_size, num_channels, height, width = pixel_values.shape
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the configuration."
)
embeddings = self.projection(pixel_values)
patch_height, patch_width = embeddings.shape[2], embeddings.shape[3]
if position_embedding is not None:
# interpolate the position embedding to the corresponding size
position_embedding = position_embedding.view(1, self.patch_shape[0], self.patch_shape[1], -1).permute(
0, 3, 1, 2
)
position_embedding = nn.functional.interpolate(
position_embedding, size=(patch_height, patch_width), mode="bicubic"
)
embeddings = embeddings + position_embedding
embeddings = embeddings.flatten(2).transpose(1, 2)
return embeddings, (patch_height, patch_width)
|
class_definition
| 9,793 | 12,164 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,353 |
class Data2VecVisionSelfAttention(nn.Module):
def __init__(self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None) -> None:
super().__init__()
self.config = config
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size {config.hidden_size,} is not a multiple of the number of attention "
f"heads {config.num_attention_heads}."
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size, bias=False)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
if window_size:
self.relative_position_bias = Data2VecVisionRelativePositionBias(config, window_size=window_size)
else:
self.relative_position_bias = None
def transpose_for_scores(self, x):
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(*new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["Data2VecVisionRelativePositionBias"] = None,
interpolate_pos_encoding: bool = False,
resolution: Optional[Tuple[int]] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
# Add relative position bias if present.
if self.relative_position_bias is not None:
height, width = resolution
window_size = (height // self.config.patch_size, width // self.config.patch_size)
attention_scores = attention_scores + self.relative_position_bias(
window_size, interpolate_pos_encoding, dim_size=hidden_states.shape[1]
)
# Add shared relative position bias if provided.
if relative_position_bias is not None:
attention_scores = attention_scores + relative_position_bias
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
return outputs
|
class_definition
| 12,264 | 16,122 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,354 |
class Data2VecVisionSdpaSelfAttention(Data2VecVisionSelfAttention):
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["Data2VecVisionRelativePositionBias"] = None,
interpolate_pos_encoding: bool = False,
resolution: Optional[Tuple[int]] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
if output_attentions or head_mask is not None:
logger.warning_once(
"`Data2VecVisionSdpaSelfAttention` is used but `torch.nn.functional.scaled_dot_product_attention` does not "
"support `output_attentions=True` or `head_mask`. Falling back to the manual attention implementation, "
"but specifying the manual implementation will be required from Transformers version v5.0.0 onwards. "
'This warning can be removed using the argument `attn_implementation="eager"` when loading the model.'
)
return super().forward(
hidden_states=hidden_states,
head_mask=head_mask,
output_attentions=output_attentions,
relative_position_bias=relative_position_bias,
interpolate_pos_encoding=interpolate_pos_encoding,
resolution=resolution,
)
mixed_query_layer = self.query(hidden_states)
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
attn_bias = None
if self.relative_position_bias is not None:
height, width = resolution
window_size = (height // self.config.patch_size, width // self.config.patch_size)
attn_bias = self.relative_position_bias(
window_size, interpolate_pos_encoding, dim_size=hidden_states.shape[1]
)
# Add shared relative position bias if provided.
if relative_position_bias is not None:
if attn_bias is None:
attn_bias = relative_position_bias
else:
attn_bias += relative_position_bias
scaling = 1 / math.sqrt(self.attention_head_size)
context_layer = torch.nn.functional.scaled_dot_product_attention(
query_layer,
key_layer,
value_layer,
attn_mask=attn_bias,
dropout_p=self.config.attention_probs_dropout_prob if self.training else 0.0,
is_causal=False,
scale=scaling,
)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(*new_context_layer_shape)
return context_layer, None
|
class_definition
| 16,226 | 19,195 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,355 |
class Data2VecVisionSelfOutput(nn.Module):
"""
The residual connection is defined in Data2VecVisionLayer instead of here (as is the case with other models), due to the
layernorm applied before each block.
"""
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor, input_tensor: torch.Tensor, gamma=None) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
|
class_definition
| 19,292 | 19,980 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,356 |
class Data2VecVisionAttention(nn.Module):
def __init__(self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None) -> None:
super().__init__()
self.attention = DATA2VEC_VISION_SELF_ATTENTION_CLASSES[config._attn_implementation](
config, window_size=window_size
)
self.output = Data2VecVisionSelfOutput(config)
self.pruned_heads = set()
def prune_heads(self, heads):
if len(heads) == 0:
return
heads, index = find_pruneable_heads_and_indices(
heads, self.attention.num_attention_heads, self.attention.attention_head_size, self.pruned_heads
)
# Prune linear layers
self.attention.query = prune_linear_layer(self.attention.query, index)
self.attention.key = prune_linear_layer(self.attention.key, index)
self.attention.value = prune_linear_layer(self.attention.value, index)
self.output.dense = prune_linear_layer(self.output.dense, index, dim=1)
# Update hyper params and store pruned heads
self.attention.num_attention_heads = self.attention.num_attention_heads - len(heads)
self.attention.all_head_size = self.attention.attention_head_size * self.attention.num_attention_heads
self.pruned_heads = self.pruned_heads.union(heads)
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["Data2VecVisionRelativePositionBias"] = None,
interpolate_pos_encoding: bool = False,
resolution: Optional[Tuple[int]] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
self_outputs = self.attention(
hidden_states, head_mask, output_attentions, relative_position_bias, interpolate_pos_encoding, resolution
)
attention_output = self.output(self_outputs[0], hidden_states)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
|
class_definition
| 20,226 | 22,321 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,357 |
class Data2VecVisionIntermediate(nn.Module):
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.hidden_size, config.intermediate_size)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = ACT2FN[config.hidden_act]
else:
self.intermediate_act_fn = config.hidden_act
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
|
class_definition
| 22,420 | 23,026 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,358 |
class Data2VecVisionOutput(nn.Module):
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__()
self.dense = nn.Linear(config.intermediate_size, config.hidden_size)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
hidden_states = self.dense(hidden_states)
hidden_states = self.dropout(hidden_states)
return hidden_states
|
class_definition
| 23,119 | 23,586 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,359 |
class Data2VecVisionLayer(nn.Module):
"""This corresponds to the Block class in the timm implementation."""
def __init__(
self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None, drop_path_rate: float = 0.0
) -> None:
super().__init__()
self.chunk_size_feed_forward = config.chunk_size_feed_forward
self.seq_len_dim = 1
self.attention = Data2VecVisionAttention(config, window_size=window_size)
self.intermediate = Data2VecVisionIntermediate(config)
self.output = Data2VecVisionOutput(config)
self.layernorm_before = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.drop_path = Data2VecVisionDropPath(drop_path_rate) if drop_path_rate > 0.0 else nn.Identity()
self.layernorm_after = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
init_values = config.layer_scale_init_value
if init_values > 0:
self.lambda_1 = nn.Parameter(init_values * torch.ones((config.hidden_size)), requires_grad=True)
self.lambda_2 = nn.Parameter(init_values * torch.ones((config.hidden_size)), requires_grad=True)
else:
self.lambda_1, self.lambda_2 = None, None
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
relative_position_bias: Optional["Data2VecVisionRelativePositionBias"] = None,
interpolate_pos_encoding: bool = False,
resolution: Optional[Tuple[int]] = None,
) -> Union[Tuple[torch.Tensor], Tuple[torch.Tensor, torch.Tensor]]:
self_attention_outputs = self.attention(
self.layernorm_before(hidden_states), # in Data2VecVision, layernorm is applied before self-attention
head_mask,
output_attentions=output_attentions,
relative_position_bias=relative_position_bias,
interpolate_pos_encoding=interpolate_pos_encoding,
resolution=resolution,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# apply lambda_1 if present
if self.lambda_1 is not None:
attention_output = self.lambda_1 * attention_output
# first residual connection
hidden_states = self.drop_path(attention_output) + hidden_states
# in Data2VecVision, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = self.output(layer_output)
if self.lambda_2 is not None:
layer_output = self.lambda_2 * layer_output
# second residual connection
layer_output = self.drop_path(layer_output) + hidden_states
outputs = (layer_output,) + outputs
return outputs
|
class_definition
| 23,699 | 26,663 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,360 |
class Data2VecVisionRelativePositionBias(nn.Module):
def __init__(self, config: Data2VecVisionConfig, window_size: tuple) -> None:
super().__init__()
self.window_size = window_size
self.num_relative_distance = (2 * window_size[0] - 1) * (2 * window_size[1] - 1) + 3
self.relative_position_bias_table = nn.Parameter(
torch.zeros(self.num_relative_distance, config.num_attention_heads)
) # 2*Wh-1 * 2*Ww-1, nH
# cls to token & token 2 cls & cls to cls
self.relative_position_indices = {}
def generate_relative_position_index(self, window_size: Tuple[int, int]) -> torch.Tensor:
"""
This method creates the relative position index, modified to support arbitrary window sizes,
as introduced in [MiDaS v3.1](https://arxiv.org/abs/2307.14460).
"""
num_relative_distance = (2 * window_size[0] - 1) * (2 * window_size[1] - 1) + 3
# cls to token & token 2 cls & cls to cls
# get pair-wise relative position index for each token inside the window
window_area = window_size[0] * window_size[1]
grid = torch.meshgrid(torch.arange(window_size[0]), torch.arange(window_size[1]), indexing="ij")
coords = torch.stack(grid) # 2, Wh, Ww
coords_flatten = torch.flatten(coords, 1) # 2, Wh*Ww
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :] # 2, Wh*Ww, Wh*Ww
relative_coords = relative_coords.permute(1, 2, 0).contiguous() # Wh*Ww, Wh*Ww, 2
relative_coords[:, :, 0] += window_size[0] - 1 # shift to start from 0
relative_coords[:, :, 1] += window_size[1] - 1
relative_coords[:, :, 0] *= 2 * window_size[1] - 1
relative_position_index = torch.zeros(size=(window_area + 1,) * 2, dtype=relative_coords.dtype)
relative_position_index[1:, 1:] = relative_coords.sum(-1) # Wh*Ww, Wh*Ww
relative_position_index[0, 0:] = num_relative_distance - 3
relative_position_index[0:, 0] = num_relative_distance - 2
relative_position_index[0, 0] = num_relative_distance - 1
return relative_position_index
def forward(self, window_size, interpolate_pos_encoding: bool = False, dim_size=None) -> torch.Tensor:
"""
Modification of timm.models.beit.py: Attention._get_rel_pos_bias to support arbitrary window sizes.
"""
old_height = 2 * self.window_size[0] - 1
old_width = 2 * self.window_size[1] - 1
new_height = 2 * window_size[0] - 1
new_width = 2 * window_size[1] - 1
old_relative_position_bias_table = self.relative_position_bias_table
old_num_relative_distance = self.num_relative_distance
new_num_relative_distance = new_height * new_width + 3
old_sub_table = old_relative_position_bias_table[: old_num_relative_distance - 3]
old_sub_table = old_sub_table.reshape(1, old_width, old_height, -1).permute(0, 3, 1, 2)
new_sub_table = nn.functional.interpolate(
old_sub_table, size=(torch_int(new_height), torch_int(new_width)), mode="bilinear"
)
new_sub_table = new_sub_table.permute(0, 2, 3, 1).reshape(new_num_relative_distance - 3, -1)
new_relative_position_bias_table = torch.cat(
[new_sub_table, old_relative_position_bias_table[old_num_relative_distance - 3 :]]
)
key = window_size
if key not in self.relative_position_indices.keys():
self.relative_position_indices[key] = self.generate_relative_position_index(window_size)
relative_position_bias = new_relative_position_bias_table[self.relative_position_indices[key].view(-1)]
# patch_size*num_patches_height, patch_size*num_patches_width, num_attention_heads
relative_position_bias = relative_position_bias.view(
window_size[0] * window_size[1] + 1, window_size[0] * window_size[1] + 1, -1
)
# num_attention_heads, patch_size*num_patches_width, patch_size*num_patches_height
relative_position_bias = relative_position_bias.permute(2, 0, 1).contiguous()
if interpolate_pos_encoding:
relative_position_bias = nn.functional.interpolate(
relative_position_bias.unsqueeze(1),
size=(dim_size, dim_size),
mode="bilinear",
align_corners=False,
).squeeze(1)
return relative_position_bias.unsqueeze(0)
|
class_definition
| 26,770 | 31,232 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,361 |
class Data2VecVisionEncoder(nn.Module):
def __init__(self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None) -> None:
super().__init__()
self.config = config
if config.use_shared_relative_position_bias:
self.relative_position_bias = Data2VecVisionRelativePositionBias(config, window_size=window_size)
else:
self.relative_position_bias = None
# stochastic depth decay rule
dpr = [x.item() for x in torch.linspace(0, config.drop_path_rate, config.num_hidden_layers)]
self.layer = nn.ModuleList(
[
Data2VecVisionLayer(
config,
window_size=window_size if config.use_relative_position_bias else None,
drop_path_rate=dpr[i],
)
for i in range(config.num_hidden_layers)
]
)
self.gradient_checkpointing = False
def forward(
self,
hidden_states: torch.Tensor,
head_mask: Optional[torch.Tensor] = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
interpolate_pos_encoding: bool = False,
resolution: Optional[Tuple[int]] = None,
return_dict: bool = True,
) -> Union[tuple, BaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
if self.gradient_checkpointing and self.training:
layer_outputs = self._gradient_checkpointing_func(
layer_module.__call__,
hidden_states,
layer_head_mask,
output_attentions,
)
else:
height, width = resolution
window_size = (height // self.config.patch_size, width // self.config.patch_size)
relative_position_bias = (
self.relative_position_bias(
window_size, interpolate_pos_encoding=interpolate_pos_encoding, dim_size=hidden_states.shape[1]
)
if self.relative_position_bias is not None
else None
)
layer_outputs = layer_module(
hidden_states,
layer_head_mask,
output_attentions,
relative_position_bias,
interpolate_pos_encoding,
resolution,
)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return BaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
|
class_definition
| 31,326 | 34,707 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,362 |
class Data2VecVisionPreTrainedModel(PreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = Data2VecVisionConfig
base_model_prefix = "data2vec_vision"
main_input_name = "pixel_values"
supports_gradient_checkpointing = True
_no_split_modules = ["Data2VecVisionLayer"]
_keys_to_ignore_on_load_unexpected = [r".*relative_position_index.*"]
_supports_sdpa = True
def _init_weights(self, module):
"""Initialize the weights"""
if isinstance(module, (nn.Linear, nn.Conv2d, nn.ConvTranspose2d)):
# Slightly different from the TF version which uses truncated_normal for initialization
# cf https://github.com/pytorch/pytorch/pull/5617
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.bias is not None:
module.bias.data.zero_()
elif isinstance(module, nn.Embedding):
module.weight.data.normal_(mean=0.0, std=self.config.initializer_range)
if module.padding_idx is not None:
module.weight.data[module.padding_idx].zero_()
elif isinstance(module, nn.LayerNorm):
module.bias.data.zero_()
module.weight.data.fill_(1.0)
|
class_definition
| 34,831 | 36,184 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,363 |
class Data2VecVisionModel(Data2VecVisionPreTrainedModel):
def __init__(self, config: Data2VecVisionConfig, add_pooling_layer: bool = False) -> None:
super().__init__(config)
self.config = config
self.embeddings = Data2VecVisionEmbeddings(config)
self.encoder = Data2VecVisionEncoder(config, window_size=self.embeddings.patch_embeddings.patch_shape)
self.layernorm = (
nn.Identity() if config.use_mean_pooling else nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
)
self.pooler = Data2VecVisionPooler(config) if add_pooling_layer else None
# Initialize weights and apply final processing
self.post_init()
def get_input_embeddings(self):
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
for layer, heads in heads_to_prune.items():
self.encoder.layer[layer].attention.prune_heads(heads)
@add_start_docstrings_to_model_forward(DATA2VEC_VISION_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=Data2VecVisionModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def forward(
self,
pixel_values: torch.Tensor,
bool_masked_pos: Optional[torch.BoolTensor] = None,
head_mask: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
interpolate_pos_encoding: bool = False,
return_dict: Optional[bool] = None,
) -> Union[tuple, Data2VecVisionModelOutputWithPooling]:
r"""
bool_masked_pos (`torch.BoolTensor` of shape `(batch_size, num_patches)`, *optional*):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
"""
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
head_mask = self.get_head_mask(head_mask, self.config.num_hidden_layers)
embedding_output, _ = self.embeddings(
pixel_values, bool_masked_pos=bool_masked_pos, interpolate_pos_encoding=interpolate_pos_encoding
)
resolution = pixel_values.shape[2:]
encoder_outputs = self.encoder(
embedding_output,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
resolution=resolution,
return_dict=return_dict,
interpolate_pos_encoding=interpolate_pos_encoding,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
head_outputs = (sequence_output, pooled_output) if pooled_output is not None else (sequence_output,)
return head_outputs + encoder_outputs[1:]
return Data2VecVisionModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
|
class_definition
| 38,411 | 42,514 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,364 |
class Data2VecVisionPooler(nn.Module):
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__()
self.layernorm = (
nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps) if config.use_mean_pooling else None
)
def forward(self, hidden_states: torch.Tensor) -> torch.Tensor:
if self.layernorm is not None:
# Mean pool the final hidden states of the patch tokens
patch_tokens = hidden_states[:, 1:, :]
pooled_output = self.layernorm(patch_tokens.mean(1))
else:
# Pool by simply taking the final hidden state of the [CLS] token
pooled_output = hidden_states[:, 0]
return pooled_output
|
class_definition
| 42,607 | 43,342 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,365 |
class Data2VecVisionForImageClassification(Data2VecVisionPreTrainedModel):
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.data2vec_vision = Data2VecVisionModel(config, add_pooling_layer=True)
# Classifier head
self.classifier = nn.Linear(config.hidden_size, config.num_labels) if config.num_labels > 0 else nn.Identity()
# Initialize weights and apply final processing
self.post_init()
@add_start_docstrings_to_model_forward(DATA2VEC_VISION_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_IMAGE_CLASS_CHECKPOINT,
output_type=ImageClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_IMAGE_CLASS_EXPECTED_OUTPUT,
)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
interpolate_pos_encoding: bool = False,
return_dict: Optional[bool] = None,
) -> Union[tuple, ImageClassifierOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.data2vec_vision(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
interpolate_pos_encoding=interpolate_pos_encoding,
return_dict=return_dict,
)
pooled_output = outputs.pooler_output if return_dict else outputs[1]
logits = self.classifier(pooled_output)
loss = None
if labels is not None:
if self.config.problem_type is None:
if self.num_labels == 1:
self.config.problem_type = "regression"
elif self.num_labels > 1 and (labels.dtype == torch.long or labels.dtype == torch.int):
self.config.problem_type = "single_label_classification"
else:
self.config.problem_type = "multi_label_classification"
if self.config.problem_type == "regression":
loss_fct = MSELoss()
if self.num_labels == 1:
loss = loss_fct(logits.squeeze(), labels.squeeze())
else:
loss = loss_fct(logits, labels)
elif self.config.problem_type == "single_label_classification":
loss_fct = CrossEntropyLoss()
loss = loss_fct(logits.view(-1, self.num_labels), labels.view(-1))
elif self.config.problem_type == "multi_label_classification":
loss_fct = BCEWithLogitsLoss()
loss = loss_fct(logits, labels)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return ImageClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
|
class_definition
| 43,761 | 47,420 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,366 |
class Data2VecVisionConvModule(nn.Module):
"""
A convolutional block that bundles conv/norm/activation layers. This block simplifies the usage of convolution
layers, which are commonly used with a norm layer (e.g., BatchNorm) and activation layer (e.g., ReLU).
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(
self,
in_channels: int,
out_channels: int,
kernel_size: Union[int, Tuple[int, int]],
padding: Union[int, Tuple[int, int], str] = 0,
bias: bool = False,
dilation: Union[int, Tuple[int, int]] = 1,
) -> None:
super().__init__()
self.conv = nn.Conv2d(
in_channels=in_channels,
out_channels=out_channels,
kernel_size=kernel_size,
padding=padding,
bias=bias,
dilation=dilation,
)
self.bn = nn.BatchNorm2d(out_channels)
self.activation = nn.ReLU()
def forward(self, input: torch.Tensor) -> torch.Tensor:
output = self.conv(input)
output = self.bn(output)
output = self.activation(output)
return output
|
class_definition
| 47,517 | 48,718 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,367 |
class Data2VecVisionPyramidPoolingBlock(nn.Module):
def __init__(self, pool_scale: int, in_channels: int, channels: int) -> None:
super().__init__()
self.layers = [
nn.AdaptiveAvgPool2d(pool_scale),
Data2VecVisionConvModule(in_channels, channels, kernel_size=1),
]
for i, layer in enumerate(self.layers):
self.add_module(str(i), layer)
def forward(self, input: torch.Tensor) -> torch.Tensor:
hidden_state = input
for layer in self.layers:
hidden_state = layer(hidden_state)
return hidden_state
|
class_definition
| 48,824 | 49,430 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,368 |
class Data2VecVisionPyramidPoolingModule(nn.Module):
"""
Pyramid Pooling Module (PPM) used in PSPNet.
Args:
pool_scales (tuple[int]): Pooling scales used in Pooling Pyramid
Module.
in_channels (int): Input channels.
channels (int): Channels after modules, before conv_seg.
align_corners (bool): align_corners argument of F.interpolate.
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(self, pool_scales: Tuple[int, ...], in_channels: int, channels: int, align_corners: bool) -> None:
super().__init__()
self.pool_scales = pool_scales
self.align_corners = align_corners
self.in_channels = in_channels
self.channels = channels
self.blocks = []
for i, pool_scale in enumerate(pool_scales):
block = Data2VecVisionPyramidPoolingBlock(
pool_scale=pool_scale, in_channels=in_channels, channels=channels
)
self.blocks.append(block)
self.add_module(str(i), block)
def forward(self, x: torch.Tensor) -> List[torch.Tensor]:
ppm_outs = []
for ppm in self.blocks:
ppm_out = ppm(x)
upsampled_ppm_out = nn.functional.interpolate(
ppm_out, size=x.size()[2:], mode="bilinear", align_corners=self.align_corners
)
ppm_outs.append(upsampled_ppm_out)
return ppm_outs
|
class_definition
| 49,537 | 51,026 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,369 |
class Data2VecVisionUperHead(nn.Module):
"""
Unified Perceptual Parsing for Scene Understanding. This head is the implementation of
[UPerNet](https://arxiv.org/abs/1807.10221).
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__()
self.pool_scales = config.pool_scales # e.g. (1, 2, 3, 6)
self.in_channels = [config.hidden_size] * 4 # e.g. [768, 768, 768, 768]
self.channels = config.hidden_size
self.align_corners = False
self.classifier = nn.Conv2d(self.channels, config.num_labels, kernel_size=1)
# PSP Module
self.psp_modules = Data2VecVisionPyramidPoolingModule(
self.pool_scales,
self.in_channels[-1],
self.channels,
align_corners=self.align_corners,
)
self.bottleneck = Data2VecVisionConvModule(
self.in_channels[-1] + len(self.pool_scales) * self.channels,
self.channels,
kernel_size=3,
padding=1,
)
# FPN Module
self.lateral_convs = nn.ModuleList()
self.fpn_convs = nn.ModuleList()
for in_channels in self.in_channels[:-1]: # skip the top layer
l_conv = Data2VecVisionConvModule(in_channels, self.channels, kernel_size=1)
fpn_conv = Data2VecVisionConvModule(self.channels, self.channels, kernel_size=3, padding=1)
self.lateral_convs.append(l_conv)
self.fpn_convs.append(fpn_conv)
self.fpn_bottleneck = Data2VecVisionConvModule(
len(self.in_channels) * self.channels,
self.channels,
kernel_size=3,
padding=1,
)
def psp_forward(self, inputs):
x = inputs[-1]
psp_outs = [x]
psp_outs.extend(self.psp_modules(x))
psp_outs = torch.cat(psp_outs, dim=1)
output = self.bottleneck(psp_outs)
return output
def forward(self, encoder_hidden_states: torch.Tensor) -> torch.Tensor:
# build laterals
laterals = [lateral_conv(encoder_hidden_states[i]) for i, lateral_conv in enumerate(self.lateral_convs)]
laterals.append(self.psp_forward(encoder_hidden_states))
# build top-down path
used_backbone_levels = len(laterals)
for i in range(used_backbone_levels - 1, 0, -1):
prev_shape = laterals[i - 1].shape[2:]
laterals[i - 1] = laterals[i - 1] + nn.functional.interpolate(
laterals[i], size=prev_shape, mode="bilinear", align_corners=self.align_corners
)
# build outputs
fpn_outs = [self.fpn_convs[i](laterals[i]) for i in range(used_backbone_levels - 1)]
# append psp feature
fpn_outs.append(laterals[-1])
for i in range(used_backbone_levels - 1, 0, -1):
fpn_outs[i] = nn.functional.interpolate(
fpn_outs[i], size=fpn_outs[0].shape[2:], mode="bilinear", align_corners=self.align_corners
)
fpn_outs = torch.cat(fpn_outs, dim=1)
output = self.fpn_bottleneck(fpn_outs)
output = self.classifier(output)
return output
|
class_definition
| 51,121 | 54,381 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,370 |
class Data2VecVisionFCNHead(nn.Module):
"""
Fully Convolution Networks for Semantic Segmentation. This head is implemented of
[FCNNet](https://arxiv.org/abs/1411.4038>).
Args:
config (Data2VecVisionConfig): Configuration.
in_channels
kernel_size (int): The kernel size for convs in the head. Default: 3.
dilation (int): The dilation rate for convs in the head. Default: 1.
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(
self,
config: Data2VecVisionConfig,
in_index: int = 2,
kernel_size: int = 3,
dilation: Union[int, Tuple[int, int]] = 1,
) -> None:
super().__init__()
self.in_channels = config.hidden_size
self.channels = config.auxiliary_channels
self.num_convs = config.auxiliary_num_convs
self.concat_input = config.auxiliary_concat_input
self.in_index = in_index
conv_padding = (kernel_size // 2) * dilation
convs = []
convs.append(
Data2VecVisionConvModule(
self.in_channels, self.channels, kernel_size=kernel_size, padding=conv_padding, dilation=dilation
)
)
for i in range(self.num_convs - 1):
convs.append(
Data2VecVisionConvModule(
self.channels, self.channels, kernel_size=kernel_size, padding=conv_padding, dilation=dilation
)
)
if self.num_convs == 0:
self.convs = nn.Identity()
else:
self.convs = nn.Sequential(*convs)
if self.concat_input:
self.conv_cat = Data2VecVisionConvModule(
self.in_channels + self.channels, self.channels, kernel_size=kernel_size, padding=kernel_size // 2
)
self.classifier = nn.Conv2d(self.channels, config.num_labels, kernel_size=1)
def forward(self, encoder_hidden_states: torch.Tensor) -> torch.Tensor:
# just take the relevant feature maps
hidden_states = encoder_hidden_states[self.in_index]
output = self.convs(hidden_states)
if self.concat_input:
output = self.conv_cat(torch.cat([hidden_states, output], dim=1))
output = self.classifier(output)
return output
|
class_definition
| 54,475 | 56,821 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,371 |
class Data2VecVisionForSemanticSegmentation(Data2VecVisionPreTrainedModel):
def __init__(self, config: Data2VecVisionConfig) -> None:
super().__init__(config)
self.num_labels = config.num_labels
self.data2vec_vision = Data2VecVisionModel(config, add_pooling_layer=False)
# FPNs
if len(self.config.out_indices) != 4:
raise ValueError(
"Data2VecVisionForSemanticSegmentation requires config.out_indices to be a list of 4 integers, "
"specifying which features to use from the backbone. One can use [3, 5, 7, 11] in case of "
"a base-sized architecture."
)
self.fpn1 = nn.Sequential(
nn.ConvTranspose2d(config.hidden_size, config.hidden_size, kernel_size=2, stride=2),
nn.BatchNorm2d(config.hidden_size),
nn.GELU(),
nn.ConvTranspose2d(config.hidden_size, config.hidden_size, kernel_size=2, stride=2),
)
self.fpn2 = nn.Sequential(
nn.ConvTranspose2d(config.hidden_size, config.hidden_size, kernel_size=2, stride=2),
)
self.fpn3 = nn.Identity()
self.fpn4 = nn.MaxPool2d(kernel_size=2, stride=2)
# Semantic segmentation head(s)
self.decode_head = Data2VecVisionUperHead(config)
self.auxiliary_head = Data2VecVisionFCNHead(config) if config.use_auxiliary_head else None
# Initialize weights and apply final processing
self.post_init()
def compute_loss(self, logits, auxiliary_logits, labels):
# upsample logits to the images' original size
upsampled_logits = nn.functional.interpolate(
logits, size=labels.shape[-2:], mode="bilinear", align_corners=False
)
if auxiliary_logits is not None:
upsampled_auxiliary_logits = nn.functional.interpolate(
auxiliary_logits, size=labels.shape[-2:], mode="bilinear", align_corners=False
)
# compute weighted loss
loss_fct = CrossEntropyLoss(ignore_index=self.config.semantic_loss_ignore_index)
main_loss = loss_fct(upsampled_logits, labels)
loss = main_loss
if auxiliary_logits is not None:
auxiliary_loss = loss_fct(upsampled_auxiliary_logits, labels)
loss += self.config.auxiliary_loss_weight * auxiliary_loss
return loss
@add_start_docstrings_to_model_forward(DATA2VEC_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=SemanticSegmenterOutput, config_class=_CONFIG_FOR_DOC)
def forward(
self,
pixel_values: Optional[torch.Tensor] = None,
head_mask: Optional[torch.Tensor] = None,
labels: Optional[torch.Tensor] = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
interpolate_pos_encoding: bool = False,
return_dict: Optional[bool] = None,
) -> Union[tuple, SemanticSegmenterOutput]:
r"""
labels (`torch.LongTensor` of shape `(batch_size, height, width)`, *optional*):
Ground truth semantic segmentation maps for computing the loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1`, a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, Data2VecVisionForSemanticSegmentation
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/data2vec-vision-base")
>>> model = Data2VecVisionForSemanticSegmentation.from_pretrained("facebook/data2vec-vision-base")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> # logits are of shape (batch_size, num_labels, height, width)
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
if labels is not None and self.config.num_labels == 1:
raise ValueError("The number of labels should be greater than one")
outputs = self.data2vec_vision(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=True, # we need the intermediate hidden states
interpolate_pos_encoding=interpolate_pos_encoding,
return_dict=return_dict,
)
encoder_hidden_states = outputs.hidden_states if return_dict else outputs[1]
# only keep certain features, and reshape
# note that we do +1 as the encoder_hidden_states also includes the initial embeddings
features = [feature for idx, feature in enumerate(encoder_hidden_states) if idx + 1 in self.config.out_indices]
batch_size = pixel_values.shape[0]
patch_resolution = self.config.image_size // self.config.patch_size
features = [
x[:, 1:, :].permute(0, 2, 1).reshape(batch_size, -1, patch_resolution, patch_resolution) for x in features
]
# apply FPNs
ops = [self.fpn1, self.fpn2, self.fpn3, self.fpn4]
for i in range(len(features)):
features[i] = ops[i](features[i])
logits = self.decode_head(features)
auxiliary_logits = None
if self.auxiliary_head is not None:
auxiliary_logits = self.auxiliary_head(features)
loss = None
if labels is not None:
loss = self.compute_loss(logits, auxiliary_logits, labels)
if not return_dict:
if output_hidden_states:
output = (logits,) + outputs[1:]
else:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return SemanticSegmenterOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states if output_hidden_states else None,
attentions=outputs.attentions,
)
|
class_definition
| 57,234 | 63,640 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_vision.py
| null | 5,372 |
class TFData2VecVisionModelOutputWithPooling(TFBaseModelOutputWithPooling):
"""
Class for outputs of [`TFData2VecVisionModel`].
Args:
last_hidden_state (`tf.Tensor` of shape `(batch_size, sequence_length, hidden_size)`):
Sequence of hidden-states at the output of the last layer of the model.
pooler_output (`tf.Tensor` of shape `(batch_size, hidden_size)`):
Average of the last layer hidden states of the patch tokens (excluding the *[CLS]* token) if
*config.use_mean_pooling* is set to True. If set to False, then the final hidden state of the *[CLS]* token
will be returned.
hidden_states (`tuple(tf.Tensor)`, *optional*, returned when `output_hidden_states=True` is passed or when `config.output_hidden_states=True`):
Tuple of `tf.Tensor` (one for the output of the embeddings + one for the output of each layer) of shape
`(batch_size, sequence_length, hidden_size)`.
Hidden-states of the model at the output of each layer plus the initial embedding outputs.
attentions (`tuple(tf.Tensor)`, *optional*, returned when `output_attentions=True` is passed or when `config.output_attentions=True`):
Tuple of `tf.Tensor` (one for each layer) of shape `(batch_size, num_heads, sequence_length,
sequence_length)`.
Attentions weights after the attention softmax, used to compute the weighted average in the self-attention
heads.
"""
last_hidden_state: tf.Tensor = None
pooler_output: tf.Tensor = None
hidden_states: Tuple[tf.Tensor] | None = None
attentions: Tuple[tf.Tensor] | None = None
|
class_definition
| 1,942 | 3,626 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,373 |
class TFData2VecVisionDropPath(keras.layers.Layer):
"""Drop paths (Stochastic Depth) per sample (when applied in main path of residual blocks).
References:
(1) github.com:rwightman/pytorch-image-models
"""
def __init__(self, drop_path, **kwargs):
super().__init__(**kwargs)
self.drop_path = drop_path
def call(self, x, training=None):
if training:
keep_prob = 1 - self.drop_path
shape = (tf.shape(x)[0],) + (1,) * (len(tf.shape(x)) - 1)
random_tensor = keep_prob + tf.random.uniform(shape, 0, 1)
random_tensor = tf.floor(random_tensor)
return (x / keep_prob) * random_tensor
return x
|
class_definition
| 3,629 | 4,334 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,374 |
class TFData2VecVisionEmbeddings(keras.layers.Layer):
"""
Construct the CLS token, position and patch embeddings. Optionally, also the mask token.
"""
def __init__(self, config: Data2VecVisionConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
self.patch_embeddings = TFData2VecVisionPatchEmbeddings(config, name="patch_embeddings")
self.num_patches = self.patch_embeddings.num_patches
self.config = config
self.dropout = keras.layers.Dropout(config.hidden_dropout_prob)
def build(self, input_shape=None):
self.cls_token = self.add_weight(
shape=(1, 1, self.config.hidden_size),
initializer=tf.random_normal_initializer(stddev=self.config.initializer_range),
trainable=True,
name="cls_token",
)
if self.config.use_mask_token:
self.mask_token = self.add_weight(
shape=(1, 1, self.config.hidden_size),
initializer=tf.random_normal_initializer(stddev=self.config.initializer_range),
trainable=True,
name="mask_token",
)
else:
self.mask_token = None
if self.config.use_absolute_position_embeddings:
self.position_embeddings = self.add_weight(
shape=(1, self.num_patches + 1, self.config.hidden_size),
initializer=tf.random_normal_initializer(stddev=self.config.initializer_range),
trainable=True,
name="position_embeddings",
)
else:
self.position_embeddings = None
if self.built:
return
self.built = True
if getattr(self, "patch_embeddings", None) is not None:
with tf.name_scope(self.patch_embeddings.name):
self.patch_embeddings.build(None)
def call(self, pixel_values: tf.Tensor, bool_masked_pos: tf.Tensor | None = None) -> tf.Tensor:
embeddings = self.patch_embeddings(pixel_values)
batch_size, seq_len, projection_dim = shape_list(embeddings)
cls_tokens = tf.tile(self.cls_token, (batch_size, 1, 1))
if bool_masked_pos is not None:
mask_tokens = tf.broadcast_to(self.mask_token, (batch_size, seq_len, projection_dim))
# replace the masked visual tokens by mask_tokens
w = bool_masked_pos[..., None]
w = tf.cast(w, mask_tokens.dtype)
# since TF doesn't support eager tensor assignment
embeddings = embeddings * (1 - w) + mask_tokens * w
embeddings = tf.concat([cls_tokens, embeddings], axis=1)
if self.position_embeddings is not None:
embeddings = embeddings + self.position_embeddings
embeddings = self.dropout(embeddings)
return embeddings
|
class_definition
| 4,337 | 7,186 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,375 |
class TFData2VecVisionPatchEmbeddings(keras.layers.Layer):
"""
Image to Patch Embedding.
"""
def __init__(self, config: Data2VecVisionConfig, **kwargs):
super().__init__(**kwargs)
self.config = config
image_size, patch_size = config.image_size, config.patch_size
num_channels, hidden_size = config.num_channels, config.hidden_size
image_size = image_size if isinstance(image_size, collections.abc.Iterable) else (image_size, image_size)
patch_size = patch_size if isinstance(patch_size, collections.abc.Iterable) else (patch_size, patch_size)
num_patches = (image_size[1] // patch_size[1]) * (image_size[0] // patch_size[0])
patch_shape = (image_size[0] // patch_size[0], image_size[1] // patch_size[1])
self.image_size = image_size
self.patch_size = patch_size
self.num_patches = num_patches
self.patch_shape = patch_shape
self.num_channels = num_channels
self.projection = keras.layers.Conv2D(
filters=hidden_size,
kernel_size=patch_size,
strides=patch_size,
padding="valid",
data_format="channels_last",
kernel_initializer="glorot_uniform", # following torch.nn.Linear
bias_initializer="zeros",
name="projection",
)
def call(self, pixel_values: tf.Tensor, training: bool = False) -> tf.Tensor:
batch_size, num_channels, height, width = shape_list(pixel_values)
if tf.executing_eagerly():
if num_channels != self.num_channels:
raise ValueError(
"Make sure that the channel dimension of the pixel values match with the one set in the"
" configuration."
)
if height != self.image_size[0] or width != self.image_size[1]:
raise ValueError(
f"Input image size ({height}*{width}) doesn't match model"
f" ({self.image_size[0]}*{self.image_size[1]})."
)
# When running on CPU, `keras.layers.Conv2D` doesn't support `NCHW` format.
# So change the input format from `NCHW` to `NHWC`.
# shape = (batch_size, in_height, in_width, in_channels=num_channels)
pixel_values = tf.transpose(pixel_values, perm=(0, 2, 3, 1))
projection = self.projection(pixel_values)
# Change the 2D spatial dimensions to a single temporal dimension.
# shape = (batch_size, num_patches, out_channels=embed_dim)
num_patches = (width // self.patch_size[1]) * (height // self.patch_size[0])
return tf.reshape(tensor=projection, shape=(batch_size, num_patches, -1))
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "projection", None) is not None:
with tf.name_scope(self.projection.name):
self.projection.build([None, None, None, self.num_channels])
|
class_definition
| 7,189 | 10,215 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,376 |
class TFData2VecVisionSelfAttention(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None, **kwargs):
super().__init__(**kwargs)
if config.hidden_size % config.num_attention_heads != 0:
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number "
f"of attention heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.sqrt_att_head_size = math.sqrt(self.attention_head_size)
self.query = keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="query"
)
self.key = keras.layers.Dense(
units=self.all_head_size,
kernel_initializer=get_initializer(config.initializer_range),
name="key",
use_bias=False,
)
self.value = keras.layers.Dense(
units=self.all_head_size, kernel_initializer=get_initializer(config.initializer_range), name="value"
)
self.dropout = keras.layers.Dropout(rate=config.attention_probs_dropout_prob)
if window_size:
self.relative_position_bias = TFData2VecVisionRelativePositionBias(
config, window_size=window_size, name="relative_position_bias"
)
else:
self.relative_position_bias = None
self.config = config
def transpose_for_scores(self, tensor: tf.Tensor, batch_size: int) -> tf.Tensor:
# Reshape from [batch_size, seq_length, all_head_size] to [batch_size, seq_length, num_attention_heads, attention_head_size]
tensor = tf.reshape(tensor=tensor, shape=(batch_size, -1, self.num_attention_heads, self.attention_head_size))
# Transpose the tensor from [batch_size, seq_length, num_attention_heads, attention_head_size] to [batch_size, num_attention_heads, seq_length, attention_head_size]
return tf.transpose(tensor, perm=[0, 2, 1, 3])
def call(
self,
hidden_states: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
relative_position_bias: Optional["TFData2VecVisionRelativePositionBias"] = None,
training: bool = False,
) -> Tuple[tf.Tensor]:
batch_size = shape_list(hidden_states)[0]
mixed_query_layer = self.query(inputs=hidden_states)
mixed_key_layer = self.key(inputs=hidden_states)
mixed_value_layer = self.value(inputs=hidden_states)
query_layer = self.transpose_for_scores(mixed_query_layer, batch_size)
key_layer = self.transpose_for_scores(mixed_key_layer, batch_size)
value_layer = self.transpose_for_scores(mixed_value_layer, batch_size)
# Take the dot product between "query" and "key" to get the raw attention scores.
# (batch size, num_heads, seq_len_q, seq_len_k)
attention_scores = tf.matmul(query_layer, key_layer, transpose_b=True)
attention_scores = attention_scores / self.sqrt_att_head_size
# Add relative position bias if present.
if self.relative_position_bias is not None:
# Passing `0.0` to the `relative_position_bias()` layer because otherwise Keras
# might complain about `Layer.call()` not being invoked properly. In this case this input
# i.e., 0.0 is not going to be used in any calculations so we're safe.
attention_scores = attention_scores + self.relative_position_bias(0.0)[None, ...]
# Add shared relative position bias if provided.
if relative_position_bias is not None:
attention_scores = attention_scores + relative_position_bias
# Normalize the attention scores to probabilities.
attention_probs = stable_softmax(logits=attention_scores, axis=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(inputs=attention_probs, training=training)
# Mask heads if we want to
if head_mask is not None:
attention_probs = tf.multiply(attention_probs, head_mask)
attention_output = tf.matmul(attention_probs, value_layer)
attention_output = tf.transpose(attention_output, perm=[0, 2, 1, 3])
# (batch_size, seq_len_q, all_head_size)
attention_output = tf.reshape(tensor=attention_output, shape=(batch_size, -1, self.all_head_size))
outputs = (attention_output, attention_probs) if output_attentions else (attention_output,)
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "query", None) is not None:
with tf.name_scope(self.query.name):
self.query.build([None, None, self.config.hidden_size])
if getattr(self, "key", None) is not None:
with tf.name_scope(self.key.name):
self.key.build([None, None, self.config.hidden_size])
if getattr(self, "value", None) is not None:
with tf.name_scope(self.value.name):
self.value.build([None, None, self.config.hidden_size])
if getattr(self, "relative_position_bias", None) is not None:
with tf.name_scope(self.relative_position_bias.name):
self.relative_position_bias.build(None)
|
class_definition
| 10,218 | 15,908 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,377 |
class TFData2VecVisionSelfOutput(keras.layers.Layer):
"""
The residual connection is defined in TFData2VecVisionLayer instead of here (as is the case with other models), due
to the layernorm applied before each block.
"""
def __init__(self, config: Data2VecVisionConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = keras.layers.Dropout(rate=config.hidden_dropout_prob)
self.config = config
def call(self, hidden_states: tf.Tensor, input_tensor: tf.Tensor, gamma=None, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.hidden_size])
|
class_definition
| 15,911 | 17,087 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,378 |
class TFData2VecVisionAttention(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None, **kwargs):
super().__init__(**kwargs)
self.attention = TFData2VecVisionSelfAttention(config, window_size=window_size, name="attention")
self.dense_output = TFData2VecVisionSelfOutput(config, name="output")
def prune_heads(self, heads):
raise NotImplementedError
def call(
self,
input_tensor: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
relative_position_bias: Optional["TFData2VecVisionRelativePositionBias"] = None,
training: bool = False,
) -> Tuple[tf.Tensor]:
self_outputs = self.attention(
hidden_states=input_tensor,
head_mask=head_mask,
output_attentions=output_attentions,
relative_position_bias=relative_position_bias,
training=training,
)
attention_output = self.dense_output(
hidden_states=self_outputs[0], input_tensor=input_tensor, training=training
)
outputs = (attention_output,) + self_outputs[1:] # add attentions if we output them
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "attention", None) is not None:
with tf.name_scope(self.attention.name):
self.attention.build(None)
if getattr(self, "dense_output", None) is not None:
with tf.name_scope(self.dense_output.name):
self.dense_output.build(None)
|
class_definition
| 17,090 | 18,750 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,379 |
class TFData2VecVisionIntermediate(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.intermediate_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
if isinstance(config.hidden_act, str):
self.intermediate_act_fn = get_tf_activation(config.hidden_act)
else:
self.intermediate_act_fn = config.hidden_act
self.config = config
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.intermediate_act_fn(hidden_states)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.hidden_size])
|
class_definition
| 18,850 | 19,892 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,380 |
class TFData2VecVisionOutput(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, **kwargs):
super().__init__(**kwargs)
self.dense = keras.layers.Dense(
units=config.hidden_size, kernel_initializer=get_initializer(config.initializer_range), name="dense"
)
self.dropout = keras.layers.Dropout(rate=config.hidden_dropout_prob)
self.config = config
def call(self, hidden_states: tf.Tensor, training: bool = False) -> tf.Tensor:
hidden_states = self.dense(inputs=hidden_states)
hidden_states = self.dropout(inputs=hidden_states, training=training)
return hidden_states
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "dense", None) is not None:
with tf.name_scope(self.dense.name):
self.dense.build([None, None, self.config.intermediate_size])
|
class_definition
| 19,895 | 20,851 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,381 |
class TFData2VecVisionLayer(keras.layers.Layer):
"""This corresponds to the Block class in the timm implementation."""
def __init__(
self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None, drop_path_rate: float = 0.0, **kwargs
):
super().__init__(**kwargs)
self.config = config
self.attention = TFData2VecVisionAttention(config, window_size=window_size, name="attention")
self.intermediate = TFData2VecVisionIntermediate(config, name="intermediate")
self.data2vec_output = TFData2VecVisionOutput(config, name="output")
self.layernorm_before = keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm_before")
self.layernorm_after = keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm_after")
# Using `layers.Activation` instead of `tf.identity` to better control `training`
# behaviour.
self.drop_path = (
TFData2VecVisionDropPath(drop_path_rate, name="drop_path")
if drop_path_rate > 0.0
else keras.layers.Activation("linear", name="drop_path")
)
self.init_values = config.layer_scale_init_value
def build(self, input_shape: tf.TensorShape = None):
if self.init_values > 0:
self.lambda_1 = self.add_weight(
shape=(self.config.hidden_size),
initializer="ones",
trainable=True,
name="lambda_1",
)
self.lambda_2 = self.add_weight(
shape=(self.config.hidden_size),
initializer="ones",
trainable=True,
name="lambda_2",
)
self.lambda_1.assign(self.init_values * tf.ones((self.config.hidden_size)))
self.lambda_2.assign(self.init_values * tf.ones((self.config.hidden_size)))
else:
self.lambda_1, self.lambda_2 = None, None
if self.built:
return
self.built = True
if getattr(self, "attention", None) is not None:
with tf.name_scope(self.attention.name):
self.attention.build(None)
if getattr(self, "intermediate", None) is not None:
with tf.name_scope(self.intermediate.name):
self.intermediate.build(None)
if getattr(self, "data2vec_output", None) is not None:
with tf.name_scope(self.data2vec_output.name):
self.data2vec_output.build(None)
if getattr(self, "layernorm_before", None) is not None:
with tf.name_scope(self.layernorm_before.name):
self.layernorm_before.build([None, None, self.config.hidden_size])
if getattr(self, "layernorm_after", None) is not None:
with tf.name_scope(self.layernorm_after.name):
self.layernorm_after.build([None, None, self.config.hidden_size])
if getattr(self, "drop_path", None) is not None:
with tf.name_scope(self.drop_path.name):
self.drop_path.build(None)
def call(
self,
hidden_states: tf.Tensor,
head_mask: tf.Tensor,
output_attentions: bool,
relative_position_bias: Optional["TFData2VecVisionRelativePositionBias"] = None,
training: bool = False,
) -> Tuple[tf.Tensor]:
self_attention_outputs = self.attention(
# in Data2VecVision, layernorm is applied before self-attention
input_tensor=self.layernorm_before(inputs=hidden_states),
head_mask=head_mask,
output_attentions=output_attentions,
relative_position_bias=relative_position_bias,
training=training,
)
attention_output = self_attention_outputs[0]
outputs = self_attention_outputs[1:] # add self attentions if we output attention weights
# apply lambda_1 if present
if self.lambda_1 is not None:
attention_output = self.lambda_1 * attention_output
# first residual connection
hidden_states = self.drop_path(attention_output) + hidden_states
# in Data2VecVision, layernorm is also applied after self-attention
layer_output = self.layernorm_after(hidden_states)
layer_output = self.intermediate(layer_output)
layer_output = self.data2vec_output(layer_output)
if self.lambda_2 is not None:
layer_output = self.lambda_2 * layer_output
# second residual connection
layer_output = self.drop_path(layer_output) + hidden_states
outputs = (layer_output,) + outputs
return outputs
|
class_definition
| 20,854 | 25,515 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,382 |
class TFData2VecVisionRelativePositionBias(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, window_size: tuple, **kwargs) -> None:
super().__init__(**kwargs)
self.config = config
self.window_size = window_size
# +3 for cls_token_pos_len
# window_size can be something like (14, 14)
self.num_relative_distance = (2 * window_size[0] - 1) * (2 * window_size[1] - 1) + 3
self.relative_position_index = self.get_position_index()
def build(self, input_shape):
self.relative_position_bias_table = self.add_weight(
shape=(self.num_relative_distance, self.config.num_attention_heads),
initializer="zeros",
trainable=True,
name="relative_position_bias_table",
) # [2*Wh-1 * 2*Ww-1, nH]
# cls to token & token 2 cls & cls to cls
super().build(input_shape)
def get_position_index(self):
# get pair-wise relative position index for each token inside the window
xx, yy = tf.meshgrid(range(self.window_size[0]), range(self.window_size[1]))
coords = tf.stack([yy, xx], axis=0) # [2, Wh, Ww]
coords_flatten = tf.reshape(coords, [2, -1]) # [2, Wh*Ww]
relative_coords = coords_flatten[:, :, None] - coords_flatten[:, None, :] # [2, Wh*Ww, Wh*Ww]
relative_coords = tf.transpose(relative_coords, perm=[1, 2, 0]) # [Wh*Ww, Wh*Ww, 2]
xx = (relative_coords[:, :, 0] + self.window_size[0] - 1) * (2 * self.window_size[1] - 1)
yy = relative_coords[:, :, 1] + self.window_size[1] - 1
relative_coords = tf.stack([xx, yy], axis=-1)
relative_position_index = tf.reduce_sum(relative_coords, axis=-1) # [Wh*Ww, Wh*Ww]
top = tf.ones((1, relative_position_index.shape[1]), dtype=relative_position_index.dtype) * (
self.num_relative_distance - 3
)
left = tf.ones((relative_position_index.shape[0], 1), dtype=relative_position_index.dtype) * (
self.num_relative_distance - 2
)
corner = tf.ones((1, 1), dtype=relative_position_index.dtype) * (self.num_relative_distance - 1)
left_corner = tf.concat([corner, left], axis=0)
relative_position_index = tf.concat([top, relative_position_index], axis=0)
relative_position_index = tf.concat([left_corner, relative_position_index], axis=1) # [Wh*Ww + 1, Wh*Ww + 1]
return relative_position_index
def call(self, inputs=None) -> tf.Tensor:
relative_position_bias = tf.gather(self.relative_position_bias_table, self.relative_position_index, axis=0)
return tf.transpose(relative_position_bias, [2, 0, 1])
|
class_definition
| 25,661 | 28,350 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,383 |
class TFData2VecVisionEncoder(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, window_size: Optional[tuple] = None, **kwargs):
super().__init__(**kwargs)
self.config = config
if config.use_shared_relative_position_bias:
self.relative_position_bias = TFData2VecVisionRelativePositionBias(
config, window_size=window_size, name="relative_position_bias"
)
else:
self.relative_position_bias = None
# stochastic depth decay rule
dpr = list(tf.linspace(0.0, config.drop_path_rate, config.num_hidden_layers))
self.layer = [
TFData2VecVisionLayer(
config,
window_size=window_size if config.use_relative_position_bias else None,
drop_path_rate=dpr[i],
name=f"layer_._{i}",
)
for i in range(config.num_hidden_layers)
]
def call(
self,
hidden_states: tf.Tensor,
head_mask: tf.Tensor | None = None,
output_attentions: bool = False,
output_hidden_states: bool = False,
return_dict: bool = True,
) -> Union[tuple, TFBaseModelOutput]:
all_hidden_states = () if output_hidden_states else None
all_self_attentions = () if output_attentions else None
for i, layer_module in enumerate(self.layer):
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
layer_head_mask = head_mask[i] if head_mask is not None else None
# Passing `0.0` to the `relative_position_bias()` layer because otherwise Keras
# might complain about `Layer.call()` not being invoked properly. In this case this input
# i.e., 0.0 is not going to be used in any calculations so we're safe.
relative_position_bias = (
self.relative_position_bias(0.0) if self.relative_position_bias is not None else None
)
layer_outputs = layer_module(hidden_states, layer_head_mask, output_attentions, relative_position_bias)
hidden_states = layer_outputs[0]
if output_attentions:
all_self_attentions = all_self_attentions + (layer_outputs[1],)
if output_hidden_states:
all_hidden_states = all_hidden_states + (hidden_states,)
if not return_dict:
return tuple(v for v in [hidden_states, all_hidden_states, all_self_attentions] if v is not None)
return TFBaseModelOutput(
last_hidden_state=hidden_states,
hidden_states=all_hidden_states,
attentions=all_self_attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "relative_position_bias", None) is not None:
with tf.name_scope(self.relative_position_bias.name):
self.relative_position_bias.build(None)
if getattr(self, "layer", None) is not None:
for layer in self.layer:
with tf.name_scope(layer.name):
layer.build(None)
|
class_definition
| 28,353 | 31,550 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,384 |
class TFData2VecVisionMainLayer(keras.layers.Layer):
config_class = Data2VecVisionConfig
def __init__(self, config: Data2VecVisionConfig, add_pooling_layer: bool = True, **kwargs):
super().__init__(**kwargs)
self.config = config
self.add_pooling_layer = add_pooling_layer
self.embeddings = TFData2VecVisionEmbeddings(config, name="embeddings")
self.encoder = TFData2VecVisionEncoder(
config, window_size=self.embeddings.patch_embeddings.patch_shape, name="encoder"
)
self.layernorm = (
tf.identity
if config.use_mean_pooling
else keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm")
)
# We are setting the `data_format` like so because from here on we will revert to the
# NCHW output format
self.pooler = TFData2VecVisionPooler(config, name="pooler") if add_pooling_layer else None
def get_input_embeddings(self) -> keras.layers.Layer:
return self.embeddings.patch_embeddings
def _prune_heads(self, heads_to_prune):
"""
Prunes heads of the model. heads_to_prune: dict of {layer_num: list of heads to prune in this layer} See base
class PreTrainedModel
"""
raise NotImplementedError
@unpack_inputs
def call(
self,
pixel_values: tf.Tensor | None = None,
bool_masked_pos: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[tuple, TFData2VecVisionModelOutputWithPooling]:
output_attentions = output_attentions if output_attentions is not None else self.config.output_attentions
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
if pixel_values is None:
raise ValueError("You have to specify pixel_values")
# Prepare head mask if needed
# 1.0 in head_mask indicate we keep the head
# attention_probs has shape bsz x n_heads x N x N
# input head_mask has shape [num_heads] or [num_hidden_layers x num_heads]
# and head_mask is converted to shape [num_hidden_layers x batch x num_heads x seq_length x seq_length]
if head_mask is not None:
raise NotImplementedError
else:
head_mask = [None] * self.config.num_hidden_layers
embedding_output = self.embeddings(pixel_values, bool_masked_pos, training=training)
encoder_outputs = self.encoder(
embedding_output,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
sequence_output = encoder_outputs[0]
sequence_output = self.layernorm(sequence_output)
pooled_output = self.pooler(sequence_output) if self.pooler is not None else None
if not return_dict:
head_outputs = (sequence_output, pooled_output) if pooled_output is not None else (sequence_output,)
return head_outputs + encoder_outputs[1:]
return TFData2VecVisionModelOutputWithPooling(
last_hidden_state=sequence_output,
pooler_output=pooled_output,
hidden_states=encoder_outputs.hidden_states,
attentions=encoder_outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "embeddings", None) is not None:
with tf.name_scope(self.embeddings.name):
self.embeddings.build(None)
if getattr(self, "encoder", None) is not None:
with tf.name_scope(self.encoder.name):
self.encoder.build(None)
if getattr(self, "layernorm", None) is not None:
if hasattr(self.layernorm, "name"):
with tf.name_scope(self.layernorm.name):
self.layernorm.build((None, self.config.hidden_size))
if getattr(self, "pooler", None) is not None:
with tf.name_scope(self.pooler.name):
self.pooler.build(None)
|
class_definition
| 31,573 | 36,094 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,385 |
class TFData2VecVisionPooler(keras.layers.Layer):
def __init__(self, config: Data2VecVisionConfig, **kwargs):
super().__init__(**kwargs)
self.layernorm = (
keras.layers.LayerNormalization(epsilon=config.layer_norm_eps, name="layernorm")
if config.use_mean_pooling
else None
)
self.config = config
def call(self, hidden_states: tf.Tensor) -> tf.Tensor:
if self.layernorm is not None:
# Mean pool the final hidden states of the patch tokens
patch_tokens = hidden_states[:, 1:, :]
pooled_output = self.layernorm(tf.reduce_mean(patch_tokens, axis=1))
else:
# Pool by simply taking the final hidden state of the [CLS] token
pooled_output = hidden_states[:, 0]
return pooled_output
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "layernorm", None) is not None:
if hasattr(self.layernorm, "name"):
with tf.name_scope(self.layernorm.name):
self.layernorm.build((None, self.config.hidden_size))
|
class_definition
| 36,097 | 37,278 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,386 |
class TFData2VecVisionPreTrainedModel(TFPreTrainedModel):
"""
An abstract class to handle weights initialization and a simple interface for downloading and loading pretrained
models.
"""
config_class = Data2VecVisionConfig
base_model_prefix = "data2vec_vision"
main_input_name = "pixel_values"
_keys_to_ignore_on_load_unexpected = [r"relative_position_index"]
|
class_definition
| 37,281 | 37,673 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,387 |
class TFData2VecVisionModel(TFData2VecVisionPreTrainedModel):
def __init__(self, config: Data2VecVisionConfig, add_pooling_layer: bool = False, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.config = config
self.data2vec_vision = TFData2VecVisionMainLayer(
config, add_pooling_layer=add_pooling_layer, name="data2vec_vision"
)
def get_input_embeddings(self):
return self.data2vec_vision.get_input_embeddings()
@unpack_inputs
@add_start_docstrings_to_model_forward(DATA2VEC_VISION_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_CHECKPOINT_FOR_DOC,
output_type=TFData2VecVisionModelOutputWithPooling,
config_class=_CONFIG_FOR_DOC,
modality="vision",
expected_output=_EXPECTED_OUTPUT_SHAPE,
)
def call(
self,
pixel_values: TFModelInputType | None = None,
bool_masked_pos: tf.Tensor | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
training: bool = False,
) -> Union[tuple, TFData2VecVisionModelOutputWithPooling]:
r"""
bool_masked_pos (`tf.Tensor` of shape `(batch_size, num_patches)`, *optional*):
Boolean masked positions. Indicates which patches are masked (1) and which aren't (0).
"""
outputs = self.data2vec_vision(
pixel_values=pixel_values,
bool_masked_pos=bool_masked_pos,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
return outputs
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "data2vec_vision", None) is not None:
with tf.name_scope(self.data2vec_vision.name):
self.data2vec_vision.build(None)
|
class_definition
| 41,939 | 44,066 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,388 |
class TFData2VecVisionForImageClassification(TFData2VecVisionPreTrainedModel, TFSequenceClassificationLoss):
def __init__(self, config: Data2VecVisionConfig, *inputs, **kwargs):
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.data2vec_vision = TFData2VecVisionMainLayer(config, add_pooling_layer=True, name="data2vec_vision")
# Classifier head
self.classifier = keras.layers.Dense(
units=config.num_labels,
kernel_initializer=get_initializer(config.initializer_range),
name="classifier",
)
self.config = config
@unpack_inputs
@add_start_docstrings_to_model_forward(DATA2VEC_VISION_INPUTS_DOCSTRING)
@add_code_sample_docstrings(
checkpoint=_IMAGE_CLASS_CHECKPOINT,
output_type=TFSequenceClassifierOutput,
config_class=_CONFIG_FOR_DOC,
expected_output=_IMAGE_CLASS_EXPECTED_OUTPUT,
)
def call(
self,
pixel_values: TFModelInputType | None = None,
head_mask: np.ndarray | tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
labels: np.ndarray | tf.Tensor | None = None,
training: Optional[bool] = False,
) -> Union[TFSequenceClassifierOutput, tuple]:
r"""
labels (`tf.Tensor` or `np.ndarray` of shape `(batch_size,)`, *optional*):
Labels for computing the image classification/regression loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels == 1` a regression loss is computed (Mean-Square loss), If
`config.num_labels > 1` a classification loss is computed (Cross-Entropy).
"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
outputs = self.data2vec_vision(
pixel_values=pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=output_hidden_states,
return_dict=return_dict,
training=training,
)
pooled_output = outputs.pooler_output if return_dict else outputs[1]
logits = self.classifier(pooled_output)
loss = None if labels is None else self.hf_compute_loss(labels=labels, logits=logits)
if not return_dict:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSequenceClassifierOutput(
loss=loss,
logits=logits,
hidden_states=outputs.hidden_states,
attentions=outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "data2vec_vision", None) is not None:
with tf.name_scope(self.data2vec_vision.name):
self.data2vec_vision.build(None)
if getattr(self, "classifier", None) is not None:
with tf.name_scope(self.classifier.name):
self.classifier.build([None, None, self.config.hidden_size])
|
class_definition
| 44,335 | 47,569 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,389 |
class TFData2VecVisionConvModule(keras.layers.Layer):
"""
A convolutional block that bundles conv/norm/activation layers. This block simplifies the usage of convolution
layers, which are commonly used with a norm layer (e.g., BatchNorm) and activation layer (e.g., ReLU).
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(
self,
in_channels: int,
out_channels: int,
kernel_size: Union[int, Tuple[int, int]],
padding: str = "valid",
bias: bool = False,
dilation: Union[int, Tuple[int, int]] = 1,
**kwargs,
) -> None:
super().__init__(**kwargs)
self.conv = keras.layers.Conv2D(
filters=out_channels,
kernel_size=kernel_size,
padding=padding,
use_bias=bias,
dilation_rate=dilation,
name="conv",
)
self.bn = keras.layers.BatchNormalization(name="bn", momentum=0.9, epsilon=1e-5)
self.activation = tf.nn.relu
self.in_channels = in_channels
self.out_channels = out_channels
def call(self, input: tf.Tensor) -> tf.Tensor:
output = self.conv(input)
output = self.bn(output)
output = self.activation(output)
return output
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "conv", None) is not None:
with tf.name_scope(self.conv.name):
self.conv.build([None, None, None, self.in_channels])
if getattr(self, "bn", None) is not None:
with tf.name_scope(self.bn.name):
self.bn.build((None, None, None, self.out_channels))
|
class_definition
| 47,572 | 49,345 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,390 |
class TFAdaptiveAvgPool2D(keras.layers.Layer):
def __init__(self, output_dims: Tuple[int, int], input_ordering: str = "NHWC", **kwargs):
super().__init__(**kwargs)
self.output_dims = output_dims
self.input_ordering = input_ordering
if input_ordering not in ("NCHW", "NHWC"):
raise ValueError("Unrecognized input_ordering, should be 'NCHW' or 'NHWC'!")
self.h_axis = input_ordering.index("H")
self.w_axis = input_ordering.index("W")
def pseudo_1d_pool(self, inputs: tf.Tensor, h_pooling: bool):
# Figure out which axis we're pooling on
if h_pooling:
axis = self.h_axis
output_dim = self.output_dims[0]
else:
axis = self.w_axis
output_dim = self.output_dims[1]
input_dim = inputs.shape[axis]
# Figure out the potential pooling windows
# This is the key idea - the torch op always uses only two
# consecutive pooling window sizes, like 3 and 4. Therefore,
# if we pool with both possible sizes, we simply need to gather
# the 'correct' pool at each position to reimplement the torch op.
small_window = math.ceil(input_dim / output_dim)
big_window = small_window + 1
if h_pooling:
output_dim = self.output_dims[0]
small_window_shape = (small_window, 1)
big_window_shape = (big_window, 1)
else:
output_dim = self.output_dims[1]
small_window_shape = (1, small_window)
big_window_shape = (1, big_window)
# For resizes to 1, or integer resizes, we can take quick shortcuts
if output_dim == input_dim:
return inputs
elif output_dim == 1:
return tf.reduce_mean(inputs, axis=axis, keepdims=True)
elif input_dim % output_dim == 0:
return tf.nn.avg_pool2d(
inputs,
ksize=small_window_shape,
strides=small_window_shape,
padding="VALID",
data_format=self.input_ordering,
)
# When upscaling by an integer factor we can also take a quick shortcut
elif output_dim > input_dim and output_dim % input_dim == 0:
return tf.repeat(inputs, repeats=output_dim // input_dim, axis=axis)
# For non-integer resizes, we pool with both possible window sizes and concatenate them
if output_dim < input_dim:
small_pool = tf.nn.avg_pool2d(
inputs, ksize=small_window_shape, strides=1, padding="VALID", data_format=self.input_ordering
)
big_pool = tf.nn.avg_pool2d(
inputs, ksize=big_window_shape, strides=1, padding="VALID", data_format=self.input_ordering
)
both_pool = tf.concat([small_pool, big_pool], axis=axis)
else:
# When we're actually upscaling instead, then we build the pools a bit differently
small_pool = inputs
big_pool = tf.nn.avg_pool2d(
inputs, ksize=big_window_shape, strides=1, padding="VALID", data_format=self.input_ordering
)
both_pool = tf.concat([small_pool, big_pool], axis=axis)
# We compute vectors of the start and end positions for each pooling window
# Each (start, end) pair here corresponds to a single output position
window_starts = tf.math.floor((tf.range(output_dim, dtype=tf.float32) * input_dim) / output_dim)
window_starts = tf.cast(window_starts, tf.int64)
window_ends = tf.math.ceil((tf.range(1, output_dim + 1, dtype=tf.float32) * input_dim) / output_dim)
window_ends = tf.cast(window_ends, tf.int64)
# pool_selector is a boolean array of shape (output_dim,) where 1 indicates that output position
# has a big receptive field and 0 indicates that that output position has a small receptive field
pool_selector = tf.cast(window_ends - window_starts - small_window, tf.bool)
# Since we concatenated the small and big pools, we need to do a bit of
# pointer arithmetic to get the indices of the big pools
small_indices = window_starts
big_indices = window_starts + small_pool.shape[axis]
# Finally, we use the pool_selector to generate a list of indices, one per output position
gather_indices = tf.where(pool_selector, big_indices, small_indices)
# Gathering from those indices yields the final, correct pooling
return tf.gather(both_pool, gather_indices, axis=axis)
def call(self, inputs: tf.Tensor):
if self.input_ordering == "NHWC":
input_shape = inputs.shape[1:3]
else:
input_shape = inputs.shape[2:]
# We break the task down into each possible case
# Firstly, if we're resizing down to 1, it's just tf.reduce_mean
if self.output_dims[0] == self.output_dims[1] == 1:
if self.input_ordering == "NHWC":
reduce_dims = [1, 2]
else:
reduce_dims = [2, 3]
return tf.reduce_mean(inputs, axis=reduce_dims, keepdims=True)
# Secondly, if we're resizing by an integer factor on both dimensions, we can take a quick shortcut
elif input_shape[0] % self.output_dims[0] == 0 and input_shape[1] % self.output_dims[1] == 0:
h_resize = int(input_shape[0] // self.output_dims[0])
w_resize = int(input_shape[1] // self.output_dims[1])
return tf.nn.avg_pool2d(
inputs,
ksize=(h_resize, w_resize),
strides=(h_resize, w_resize),
padding="VALID",
data_format=self.input_ordering,
)
else:
# Finally, if we can't take the shortcut, we do a 1D pool on each axis. pseudo_1d_pool will take a shortcut
# for dimensions where an integer resize is possible. It can also handle upscaling.
h_pooled = self.pseudo_1d_pool(inputs, h_pooling=True)
return self.pseudo_1d_pool(h_pooled, h_pooling=False)
|
class_definition
| 49,348 | 55,476 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,391 |
class TFData2VecVisionPyramidPoolingModule(keras.layers.Layer):
"""
Pyramid Pooling Module (PPM) used in PSPNet.
Args:
pool_scales (tuple[int]): Pooling scales used in Pooling Pyramid
Module.
channels (int): Channels after modules, before conv_seg.
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(self, pool_scales: Tuple[int, ...], in_channels: int, out_channels: int, **kwargs) -> None:
super().__init__(**kwargs)
self.pool_scales = pool_scales
self.in_channels = in_channels
self.out_channels = out_channels
self.layer_list = []
for idx, pool_scale in enumerate(pool_scales):
pool_scale = pool_scale if isinstance(pool_scale, collections.abc.Iterable) else (pool_scale, pool_scale)
self.layer_list.append(
[
TFAdaptiveAvgPool2D(output_dims=pool_scale),
TFData2VecVisionConvModule(
in_channels=in_channels, out_channels=self.out_channels, kernel_size=1, name=f"{idx}.1"
),
]
)
def call(self, x: tf.Tensor) -> List[tf.Tensor]:
ppm_outs = []
inputs = x
for ppm in self.layer_list:
for layer_module in ppm:
ppm_out = layer_module(x)
x = ppm_out
upsampled_ppm_out = tf.image.resize(ppm_out, size=shape_list(inputs)[1:-1], method="bilinear")
ppm_outs.append(upsampled_ppm_out)
return ppm_outs
def build(self, input_shape=None):
for layer in self.layer_list:
for layer_module in layer:
with tf.name_scope(layer_module.name):
layer_module.build(None)
|
class_definition
| 55,479 | 57,309 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,392 |
class TFData2VecVisionUperHead(keras.layers.Layer):
"""
Unified Perceptual Parsing for Scene Understanding. This head is the implementation of
[UPerNet](https://arxiv.org/abs/1807.10221).
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(self, config: Data2VecVisionConfig, **kwargs) -> None:
super().__init__(**kwargs)
self.pool_scales = config.pool_scales # e.g. (1, 2, 3, 6)
self.in_channels = [config.hidden_size] * 4 # e.g. [768, 768, 768, 768]
self.channels = config.hidden_size
self.classifier = keras.layers.Conv2D(config.num_labels, kernel_size=1, name="classifier")
# PSP Module
self.psp_modules = TFData2VecVisionPyramidPoolingModule(
self.pool_scales, self.in_channels[-1], self.channels, name="psp_modules"
)
self.bottleneck = TFData2VecVisionConvModule(
self.in_channels[-1] + len(self.pool_scales) * self.channels,
self.channels,
kernel_size=3,
padding="same",
name="bottleneck",
)
# FPN Module
self.lateral_convs = []
self.fpn_convs = []
for idx, in_channels in enumerate(self.in_channels[:-1]): # skip the top layer
l_conv = TFData2VecVisionConvModule(
in_channels, out_channels=self.channels, kernel_size=1, name=f"lateral_convs.{idx}"
)
fpn_conv = TFData2VecVisionConvModule(
in_channels=self.channels,
out_channels=self.channels,
kernel_size=3,
padding="same",
name=f"fpn_convs.{idx}",
)
self.lateral_convs.append(l_conv)
self.fpn_convs.append(fpn_conv)
self.fpn_bottleneck = TFData2VecVisionConvModule(
in_channels=len(self.in_channels) * self.channels,
out_channels=self.channels,
kernel_size=3,
padding="same",
name="fpn_bottleneck",
)
def psp_forward(self, inputs):
x = inputs[-1]
psp_outs = [x]
psp_outs.extend(self.psp_modules(x))
psp_outs = tf.concat(psp_outs, axis=-1)
output = self.bottleneck(psp_outs)
return output
def call(self, encoder_hidden_states: tf.Tensor) -> tf.Tensor:
# build laterals
laterals = [lateral_conv(encoder_hidden_states[i]) for i, lateral_conv in enumerate(self.lateral_convs)]
laterals.append(self.psp_forward(encoder_hidden_states))
# build top-down path
used_backbone_levels = len(laterals)
for i in range(used_backbone_levels - 1, 0, -1):
prev_shape = shape_list(laterals[i - 1])[1:-1]
laterals[i - 1] = laterals[i - 1] + tf.image.resize(laterals[i], size=prev_shape, method="bilinear")
# build outputs
fpn_outs = [self.fpn_convs[i](laterals[i]) for i in range(used_backbone_levels - 1)]
# append psp feature
fpn_outs.append(laterals[-1])
for i in range(used_backbone_levels - 1, 0, -1):
fpn_outs[i] = tf.image.resize(fpn_outs[i], size=shape_list(fpn_outs[0])[1:-1], method="bilinear")
fpn_outs = tf.concat(fpn_outs, axis=-1)
output = self.fpn_bottleneck(fpn_outs)
output = self.classifier(output)
return output
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "classifier", None) is not None:
with tf.name_scope(self.classifier.name):
self.classifier.build([None, None, None, self.channels])
if getattr(self, "psp_modules", None) is not None:
with tf.name_scope(self.psp_modules.name):
self.psp_modules.build(None)
if getattr(self, "bottleneck", None) is not None:
with tf.name_scope(self.bottleneck.name):
self.bottleneck.build(None)
if getattr(self, "fpn_bottleneck", None) is not None:
with tf.name_scope(self.fpn_bottleneck.name):
self.fpn_bottleneck.build(None)
for layer in self.lateral_convs:
with tf.name_scope(layer.name):
layer.build(None)
for layer in self.fpn_convs:
with tf.name_scope(layer.name):
layer.build(None)
|
class_definition
| 57,312 | 61,729 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,393 |
class TFData2VecVisionFCNHead(keras.layers.Layer):
"""
Fully Convolution Networks for Semantic Segmentation. This head is implemented from
[FCNNet](https://arxiv.org/abs/1411.4038).
Args:
config (Data2VecVisionConfig): Configuration.
kernel_size (int): The kernel size for convs in the head. Default: 3.
dilation (int): The dilation rate for convs in the head. Default: 1.
Based on OpenMMLab's implementation, found in https://github.com/open-mmlab/mmsegmentation.
"""
def __init__(
self,
config: Data2VecVisionConfig,
in_index: int = 2,
kernel_size: int = 3,
dilation: Union[int, Tuple[int, int]] = 1,
**kwargs,
) -> None:
super().__init__(**kwargs)
self.in_channels = config.hidden_size
self.channels = config.auxiliary_channels
self.num_convs = config.auxiliary_num_convs
self.concat_input = config.auxiliary_concat_input
self.in_index = in_index
convs = []
convs.append(
TFData2VecVisionConvModule(
in_channels=self.in_channels,
out_channels=self.channels,
kernel_size=kernel_size,
padding="same",
dilation=dilation,
name="convs.0",
)
)
for i in range(self.num_convs - 1):
convs.append(
TFData2VecVisionConvModule(
in_channels=self.channels,
out_channels=self.channels,
kernel_size=kernel_size,
padding="same",
dilation=dilation,
name=f"conv_module_{i+2}",
)
)
if self.num_convs == 0:
self.convs = [tf.identity]
else:
self.convs = convs
if self.concat_input:
self.conv_cat = TFData2VecVisionConvModule(
self.in_channels + self.channels,
out_channels=self.channels,
kernel_size=kernel_size,
padding="same",
name="conv_cat",
)
self.classifier = keras.layers.Conv2D(config.num_labels, kernel_size=1, name="classifier")
def call(self, encoder_hidden_states: tf.Tensor) -> tf.Tensor:
# just take the relevant feature maps
hidden_states = encoder_hidden_states[self.in_index]
output = hidden_states
for layer_module in self.convs:
output = layer_module(output)
if self.concat_input:
output = self.conv_cat(tf.concat([hidden_states, output], axis=-1))
output = self.classifier(output)
return output
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "classifier", None) is not None:
with tf.name_scope(self.classifier.name):
self.classifier.build([None, None, None, self.channels])
if getattr(self, "conv_cat", None) is not None:
with tf.name_scope(self.conv_cat.name):
self.conv_cat.build(None)
|
class_definition
| 61,732 | 64,901 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,394 |
class TFData2VecVisionForSemanticSegmentation(TFData2VecVisionPreTrainedModel):
def __init__(self, config: Data2VecVisionConfig, *inputs, **kwargs) -> None:
super().__init__(config, *inputs, **kwargs)
self.num_labels = config.num_labels
self.data2vec_vision = TFData2VecVisionMainLayer(config, add_pooling_layer=False, name="data2vec_vision")
# FPNs
self.fpn1 = [
keras.layers.Conv2DTranspose(config.hidden_size, kernel_size=2, strides=2, name="fpn1.0"),
keras.layers.BatchNormalization(name="fpn1.1", momentum=0.9, epsilon=1e-5),
keras.layers.Activation("gelu"),
keras.layers.Conv2DTranspose(config.hidden_size, kernel_size=2, strides=2, name="fpn1.3"),
]
self.fpn2 = [keras.layers.Conv2DTranspose(config.hidden_size, kernel_size=2, strides=2, name="fpn2.0")]
self.fpn3 = tf.identity
self.fpn4 = keras.layers.MaxPool2D(pool_size=2, strides=2)
# Semantic segmentation head(s)
self.decode_head = TFData2VecVisionUperHead(config, name="decode_head")
self.auxiliary_head = (
TFData2VecVisionFCNHead(config, name="auxiliary_head") if config.use_auxiliary_head else None
)
def compute_loss(self, logits, auxiliary_logits, labels):
# upsample logits to the images' original size
if len(shape_list(labels)) > 3:
label_interp_shape = shape_list(labels)[1:-1]
else:
label_interp_shape = shape_list(labels)[-2:]
upsampled_logits = tf.image.resize(logits, size=label_interp_shape, method="bilinear")
if auxiliary_logits is not None:
upsampled_auxiliary_logits = tf.image.resize(auxiliary_logits, size=label_interp_shape, method="bilinear")
# compute weighted loss
loss_fct = keras.losses.SparseCategoricalCrossentropy(from_logits=True, reduction="none")
# Copied from https://www.tensorflow.org/text/tutorials/transformer#loss_and_metrics.
# Utility to mask the index to ignore during computing the loss.
def masked_loss(real, pred):
mask = tf.math.logical_not(tf.math.equal(real, self.config.semantic_loss_ignore_index))
loss_ = loss_fct(real, pred)
mask = tf.cast(mask, dtype=loss_.dtype)
loss_ *= mask
reduced_masked_loss = tf.reduce_sum(loss_) / tf.reduce_sum(mask)
return tf.reshape(reduced_masked_loss, (1,))
main_loss = masked_loss(labels, upsampled_logits)
auxiliary_loss = masked_loss(labels, upsampled_auxiliary_logits)
loss = main_loss + self.config.auxiliary_loss_weight * auxiliary_loss
return loss
@unpack_inputs
@add_start_docstrings_to_model_forward(DATA2VEC_VISION_INPUTS_DOCSTRING)
@replace_return_docstrings(output_type=TFSemanticSegmenterOutput, config_class=_CONFIG_FOR_DOC)
def call(
self,
pixel_values: tf.Tensor | None = None,
head_mask: tf.Tensor | None = None,
labels: tf.Tensor | None = None,
output_attentions: Optional[bool] = None,
output_hidden_states: Optional[bool] = None,
return_dict: Optional[bool] = None,
) -> Union[tuple, TFSemanticSegmenterOutput]:
r"""
labels (`tf.Tensor` of shape `(batch_size, height, width)`, *optional*):
Ground truth semantic segmentation maps for computing the loss. Indices should be in `[0, ...,
config.num_labels - 1]`. If `config.num_labels > 1`, a classification loss is computed (Cross-Entropy).
Returns:
Examples:
```python
>>> from transformers import AutoImageProcessor, TFData2VecVisionForSemanticSegmentation
>>> from PIL import Image
>>> import requests
>>> url = "http://images.cocodataset.org/val2017/000000039769.jpg"
>>> image = Image.open(requests.get(url, stream=True).raw)
>>> image_processor = AutoImageProcessor.from_pretrained("facebook/data2vec-vision-base")
>>> model = TFData2VecVisionForSemanticSegmentation.from_pretrained("facebook/data2vec-vision-base")
>>> inputs = image_processor(images=image, return_tensors="pt")
>>> outputs = model(**inputs)
>>> # logits are of shape (batch_size, num_labels, height, width)
>>> logits = outputs.logits
```"""
return_dict = return_dict if return_dict is not None else self.config.use_return_dict
output_hidden_states = (
output_hidden_states if output_hidden_states is not None else self.config.output_hidden_states
)
if labels is not None and self.config.num_labels == 1:
raise ValueError("The number of labels should be greater than one")
outputs = self.data2vec_vision(
pixel_values,
head_mask=head_mask,
output_attentions=output_attentions,
output_hidden_states=True, # we need the intermediate hidden states
return_dict=return_dict,
)
encoder_hidden_states = outputs.hidden_states if return_dict else outputs[1]
# only keep certain features, and reshape
# note that we do +1 as the encoder_hidden_states also includes the initial embeddings
features = [feature for idx, feature in enumerate(encoder_hidden_states) if idx + 1 in self.config.out_indices]
patch_resolution = self.config.image_size // self.config.patch_size
def reshape_features(x):
# We do it this way so TF can always infer the non-batch dims at compile time
x = tf.reshape(x, (-1, patch_resolution, patch_resolution, self.config.hidden_size))
return x
features = [reshape_features(x[:, 1:, :]) for x in features]
# apply FPNs
ops = [self.fpn1, self.fpn2, self.fpn3, self.fpn4]
for module in ops[0]:
features[0] = module(features[0])
features[1] = ops[1][0](features[1])
for i in range(len(features[2:])):
features[i + 2] = ops[i + 2](features[i + 2])
logits = self.decode_head(features)
# Tranpose the logits to maintain consistency in the output formats.
transposed_logits = tf.transpose(logits, perm=[0, 3, 1, 2])
auxiliary_logits = None
if self.auxiliary_head is not None:
auxiliary_logits = self.auxiliary_head(features)
loss = None
if labels is not None:
loss = self.compute_loss(logits, auxiliary_logits, labels)
if not return_dict:
if output_hidden_states:
output = (logits,) + outputs[1:]
else:
output = (logits,) + outputs[2:]
return ((loss,) + output) if loss is not None else output
return TFSemanticSegmenterOutput(
loss=loss,
logits=transposed_logits,
hidden_states=outputs.hidden_states if output_hidden_states else None,
attentions=outputs.attentions,
)
def build(self, input_shape=None):
if self.built:
return
self.built = True
if getattr(self, "data2vec_vision", None) is not None:
with tf.name_scope(self.data2vec_vision.name):
self.data2vec_vision.build(None)
if getattr(self, "decode_head", None) is not None:
with tf.name_scope(self.decode_head.name):
self.decode_head.build(None)
if getattr(self, "auxiliary_head", None) is not None:
with tf.name_scope(self.auxiliary_head.name):
self.auxiliary_head.build(None)
if getattr(self, "fpn1", None) is not None:
with tf.name_scope(self.fpn1[0].name):
self.fpn1[0].build([None, None, None, self.config.hidden_size])
with tf.name_scope(self.fpn1[1].name):
self.fpn1[1].build((None, None, None, self.config.hidden_size))
with tf.name_scope(self.fpn1[3].name):
self.fpn1[3].build([None, None, None, self.config.hidden_size])
if getattr(self, "fpn2", None) is not None:
with tf.name_scope(self.fpn2[0].name):
self.fpn2[0].build([None, None, None, self.config.hidden_size])
|
class_definition
| 65,090 | 73,347 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_tf_data2vec_vision.py
| null | 5,395 |
class Data2VecVisionConfig(PretrainedConfig):
r"""
This is the configuration class to store the configuration of a [`Data2VecVisionModel`]. It is used to instantiate
an Data2VecVision model according to the specified arguments, defining the model architecture. Instantiating a
configuration with the defaults will yield a similar configuration to that of the Data2VecVision
[facebook/data2vec-vision-base](https://huggingface.co/facebook/data2vec-vision-base) architecture.
Args:
hidden_size (`int`, *optional*, defaults to 768):
Dimensionality of the encoder layers and the pooler layer.
num_hidden_layers (`int`, *optional*, defaults to 12):
Number of hidden layers in the Transformer encoder.
num_attention_heads (`int`, *optional*, defaults to 12):
Number of attention heads for each attention layer in the Transformer encoder.
intermediate_size (`int`, *optional*, defaults to 3072):
Dimensionality of the "intermediate" (i.e., feed-forward) layer in the Transformer encoder.
hidden_act (`str` or `function`, *optional*, defaults to `"gelu"`):
The non-linear activation function (function or string) in the encoder and pooler. If string, `"gelu"`,
`"relu"`, `"selu"` and `"gelu_new"` are supported.
hidden_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout probability for all fully connected layers in the embeddings, encoder, and pooler.
attention_probs_dropout_prob (`float`, *optional*, defaults to 0.0):
The dropout ratio for the attention probabilities.
initializer_range (`float`, *optional*, defaults to 0.02):
The standard deviation of the truncated_normal_initializer for initializing all weight matrices.
layer_norm_eps (`float`, *optional*, defaults to 1e-12):
The epsilon used by the layer normalization layers.
image_size (`int`, *optional*, defaults to 224):
The size (resolution) of each image.
patch_size (`int`, *optional*, defaults to 16):
The size (resolution) of each patch.
num_channels (`int`, *optional*, defaults to 3):
The number of input channels.
use_mask_token (`bool`, *optional*, defaults to `False`):
Whether to use a mask token for masked image modeling.
use_absolute_position_embeddings (`bool`, *optional*, defaults to `False`):
Whether to use BERT-style absolute position embeddings.
use_relative_position_bias (`bool`, *optional*, defaults to `False`):
Whether to use T5-style relative position embeddings in the self-attention layers.
use_shared_relative_position_bias (`bool`, *optional*, defaults to `False`):
Whether to use the same relative position embeddings across all self-attention layers of the Transformer.
layer_scale_init_value (`float`, *optional*, defaults to 0.1):
Scale to use in the self-attention layers. 0.1 for base, 1e-5 for large. Set 0 to disable layer scale.
drop_path_rate (`float`, *optional*, defaults to 0.1):
Stochastic depth rate per sample (when applied in the main path of residual layers).
use_mean_pooling (`bool`, *optional*, defaults to `True`):
Whether to mean pool the final hidden states of the patches instead of using the final hidden state of the
CLS token, before applying the classification head.
out_indices (`List[int]`, *optional*, defaults to `[3, 5, 7, 11]`):
Indices of the feature maps to use for semantic segmentation.
pool_scales (`Tuple[int]`, *optional*, defaults to `[1, 2, 3, 6]`):
Pooling scales used in Pooling Pyramid Module applied on the last feature map.
use_auxiliary_head (`bool`, *optional*, defaults to `True`):
Whether to use an auxiliary head during training.
auxiliary_loss_weight (`float`, *optional*, defaults to 0.4):
Weight of the cross-entropy loss of the auxiliary head.
auxiliary_channels (`int`, *optional*, defaults to 256):
Number of channels to use in the auxiliary head.
auxiliary_num_convs (`int`, *optional*, defaults to 1):
Number of convolutional layers to use in the auxiliary head.
auxiliary_concat_input (`bool`, *optional*, defaults to `False`):
Whether to concatenate the output of the auxiliary head with the input before the classification layer.
semantic_loss_ignore_index (`int`, *optional*, defaults to 255):
The index that is ignored by the loss function of the semantic segmentation model.
Example:
```python
>>> from transformers import Data2VecVisionConfig, Data2VecVisionModel
>>> # Initializing a Data2VecVision data2vec_vision-base-patch16-224-in22k style configuration
>>> configuration = Data2VecVisionConfig()
>>> # Initializing a model (with random weights) from the data2vec_vision-base-patch16-224-in22k style configuration
>>> model = Data2VecVisionModel(configuration)
>>> # Accessing the model configuration
>>> configuration = model.config
```"""
model_type = "data2vec-vision"
def __init__(
self,
hidden_size=768,
num_hidden_layers=12,
num_attention_heads=12,
intermediate_size=3072,
hidden_act="gelu",
hidden_dropout_prob=0.0,
attention_probs_dropout_prob=0.0,
initializer_range=0.02,
layer_norm_eps=1e-12,
image_size=224,
patch_size=16,
num_channels=3,
use_mask_token=False,
use_absolute_position_embeddings=False,
use_relative_position_bias=False,
use_shared_relative_position_bias=False,
layer_scale_init_value=0.1,
drop_path_rate=0.1,
use_mean_pooling=True,
out_indices=[3, 5, 7, 11],
pool_scales=[1, 2, 3, 6],
use_auxiliary_head=True,
auxiliary_loss_weight=0.4,
auxiliary_channels=256,
auxiliary_num_convs=1,
auxiliary_concat_input=False,
semantic_loss_ignore_index=255,
**kwargs,
):
super().__init__(**kwargs)
self.hidden_size = hidden_size
self.num_hidden_layers = num_hidden_layers
self.num_attention_heads = num_attention_heads
self.intermediate_size = intermediate_size
self.hidden_act = hidden_act
self.hidden_dropout_prob = hidden_dropout_prob
self.attention_probs_dropout_prob = attention_probs_dropout_prob
self.initializer_range = initializer_range
self.layer_norm_eps = layer_norm_eps
self.image_size = image_size
self.patch_size = patch_size
self.num_channels = num_channels
self.use_mask_token = use_mask_token
self.use_absolute_position_embeddings = use_absolute_position_embeddings
self.use_relative_position_bias = use_relative_position_bias
self.use_shared_relative_position_bias = use_shared_relative_position_bias
self.layer_scale_init_value = layer_scale_init_value
self.drop_path_rate = drop_path_rate
self.use_mean_pooling = use_mean_pooling
# decode head attributes (semantic segmentation)
self.out_indices = out_indices
self.pool_scales = pool_scales
# auxiliary head attributes (semantic segmentation)
self.use_auxiliary_head = use_auxiliary_head
self.auxiliary_loss_weight = auxiliary_loss_weight
self.auxiliary_channels = auxiliary_channels
self.auxiliary_num_convs = auxiliary_num_convs
self.auxiliary_concat_input = auxiliary_concat_input
self.semantic_loss_ignore_index = semantic_loss_ignore_index
|
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| 931 | 8,759 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/configuration_data2vec_vision.py
| null | 5,396 |
class Data2VecVisionOnnxConfig(OnnxConfig):
torch_onnx_minimum_version = version.parse("1.11")
@property
def inputs(self) -> Mapping[str, Mapping[int, str]]:
return OrderedDict(
[
("pixel_values", {0: "batch", 1: "num_channels", 2: "height", 3: "width"}),
]
)
@property
def atol_for_validation(self) -> float:
return 1e-4
|
class_definition
| 8,832 | 9,239 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/configuration_data2vec_vision.py
| null | 5,397 |
class Data2VecTextForTextEmbeddings(nn.Module):
"""
Same as BertEmbeddings with a tiny tweak for positional embeddings indexing.
"""
# Copied from transformers.models.bert.modeling_bert.BertEmbeddings.__init__
def __init__(self, config):
super().__init__()
self.word_embeddings = nn.Embedding(config.vocab_size, config.hidden_size, padding_idx=config.pad_token_id)
self.position_embeddings = nn.Embedding(config.max_position_embeddings, config.hidden_size)
self.token_type_embeddings = nn.Embedding(config.type_vocab_size, config.hidden_size)
# self.LayerNorm is not snake-cased to stick with TensorFlow model variable name and be able to load
# any TensorFlow checkpoint file
self.LayerNorm = nn.LayerNorm(config.hidden_size, eps=config.layer_norm_eps)
self.dropout = nn.Dropout(config.hidden_dropout_prob)
# position_ids (1, len position emb) is contiguous in memory and exported when serialized
self.position_embedding_type = getattr(config, "position_embedding_type", "absolute")
self.register_buffer(
"position_ids", torch.arange(config.max_position_embeddings).expand((1, -1)), persistent=False
)
self.register_buffer(
"token_type_ids", torch.zeros(self.position_ids.size(), dtype=torch.long), persistent=False
)
# End copy
self.padding_idx = config.pad_token_id
self.position_embeddings = nn.Embedding(
config.max_position_embeddings, config.hidden_size, padding_idx=self.padding_idx
)
def forward(
self, input_ids=None, token_type_ids=None, position_ids=None, inputs_embeds=None, past_key_values_length=0
):
if position_ids is None:
if input_ids is not None:
# Create the position ids from the input token ids. Any padded tokens remain padded.
position_ids = create_position_ids_from_input_ids(input_ids, self.padding_idx, past_key_values_length)
else:
position_ids = self.create_position_ids_from_inputs_embeds(inputs_embeds)
if input_ids is not None:
input_shape = input_ids.size()
else:
input_shape = inputs_embeds.size()[:-1]
seq_length = input_shape[1]
# Setting the token_type_ids to the registered buffer in constructor where it is all zeros, which usually occurs
# when its auto-generated, registered buffer helps users when tracing the model without passing token_type_ids, solves
# issue #5664
if token_type_ids is None:
if hasattr(self, "token_type_ids"):
buffered_token_type_ids = self.token_type_ids[:, :seq_length]
buffered_token_type_ids_expanded = buffered_token_type_ids.expand(input_shape[0], seq_length)
token_type_ids = buffered_token_type_ids_expanded
else:
token_type_ids = torch.zeros(input_shape, dtype=torch.long, device=self.position_ids.device)
if inputs_embeds is None:
inputs_embeds = self.word_embeddings(input_ids)
token_type_embeddings = self.token_type_embeddings(token_type_ids)
embeddings = inputs_embeds + token_type_embeddings
if self.position_embedding_type == "absolute":
position_embeddings = self.position_embeddings(position_ids)
embeddings += position_embeddings
embeddings = self.LayerNorm(embeddings)
embeddings = self.dropout(embeddings)
return embeddings
def create_position_ids_from_inputs_embeds(self, inputs_embeds):
"""
We are provided embeddings directly. We cannot infer which are padded so just generate sequential position ids.
Args:
inputs_embeds: torch.Tensor
Returns: torch.Tensor
"""
input_shape = inputs_embeds.size()[:-1]
sequence_length = input_shape[1]
position_ids = torch.arange(
self.padding_idx + 1, sequence_length + self.padding_idx + 1, dtype=torch.long, device=inputs_embeds.device
)
return position_ids.unsqueeze(0).expand(input_shape)
|
class_definition
| 1,907 | 6,099 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_text.py
| null | 5,398 |
class Data2VecTextSelfAttention(nn.Module):
def __init__(self, config, position_embedding_type=None):
super().__init__()
if config.hidden_size % config.num_attention_heads != 0 and not hasattr(config, "embedding_size"):
raise ValueError(
f"The hidden size ({config.hidden_size}) is not a multiple of the number of attention "
f"heads ({config.num_attention_heads})"
)
self.num_attention_heads = config.num_attention_heads
self.attention_head_size = int(config.hidden_size / config.num_attention_heads)
self.all_head_size = self.num_attention_heads * self.attention_head_size
self.query = nn.Linear(config.hidden_size, self.all_head_size)
self.key = nn.Linear(config.hidden_size, self.all_head_size)
self.value = nn.Linear(config.hidden_size, self.all_head_size)
self.dropout = nn.Dropout(config.attention_probs_dropout_prob)
self.position_embedding_type = position_embedding_type or getattr(
config, "position_embedding_type", "absolute"
)
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
self.max_position_embeddings = config.max_position_embeddings
self.distance_embedding = nn.Embedding(2 * config.max_position_embeddings - 1, self.attention_head_size)
self.is_decoder = config.is_decoder
def transpose_for_scores(self, x: torch.Tensor) -> torch.Tensor:
new_x_shape = x.size()[:-1] + (self.num_attention_heads, self.attention_head_size)
x = x.view(new_x_shape)
return x.permute(0, 2, 1, 3)
def forward(
self,
hidden_states: torch.Tensor,
attention_mask: Optional[torch.FloatTensor] = None,
head_mask: Optional[torch.FloatTensor] = None,
encoder_hidden_states: Optional[torch.FloatTensor] = None,
encoder_attention_mask: Optional[torch.FloatTensor] = None,
past_key_value: Optional[Tuple[Tuple[torch.FloatTensor]]] = None,
output_attentions: Optional[bool] = False,
) -> Tuple[torch.Tensor]:
mixed_query_layer = self.query(hidden_states)
# If this is instantiated as a cross-attention module, the keys
# and values come from an encoder; the attention mask needs to be
# such that the encoder's padding tokens are not attended to.
is_cross_attention = encoder_hidden_states is not None
if is_cross_attention and past_key_value is not None:
# reuse k,v, cross_attentions
key_layer = past_key_value[0]
value_layer = past_key_value[1]
attention_mask = encoder_attention_mask
elif is_cross_attention:
key_layer = self.transpose_for_scores(self.key(encoder_hidden_states))
value_layer = self.transpose_for_scores(self.value(encoder_hidden_states))
attention_mask = encoder_attention_mask
elif past_key_value is not None:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
key_layer = torch.cat([past_key_value[0], key_layer], dim=2)
value_layer = torch.cat([past_key_value[1], value_layer], dim=2)
else:
key_layer = self.transpose_for_scores(self.key(hidden_states))
value_layer = self.transpose_for_scores(self.value(hidden_states))
query_layer = self.transpose_for_scores(mixed_query_layer)
use_cache = past_key_value is not None
if self.is_decoder:
# if cross_attention save Tuple(torch.Tensor, torch.Tensor) of all cross attention key/value_states.
# Further calls to cross_attention layer can then reuse all cross-attention
# key/value_states (first "if" case)
# if uni-directional self-attention (decoder) save Tuple(torch.Tensor, torch.Tensor) of
# all previous decoder key/value_states. Further calls to uni-directional self-attention
# can concat previous decoder key/value_states to current projected key/value_states (third "elif" case)
# if encoder bi-directional self-attention `past_key_value` is always `None`
past_key_value = (key_layer, value_layer)
# Take the dot product between "query" and "key" to get the raw attention scores.
attention_scores = torch.matmul(query_layer, key_layer.transpose(-1, -2))
if self.position_embedding_type == "relative_key" or self.position_embedding_type == "relative_key_query":
query_length, key_length = query_layer.shape[2], key_layer.shape[2]
if use_cache:
position_ids_l = torch.tensor(key_length - 1, dtype=torch.long, device=hidden_states.device).view(
-1, 1
)
else:
position_ids_l = torch.arange(query_length, dtype=torch.long, device=hidden_states.device).view(-1, 1)
position_ids_r = torch.arange(key_length, dtype=torch.long, device=hidden_states.device).view(1, -1)
distance = position_ids_l - position_ids_r
positional_embedding = self.distance_embedding(distance + self.max_position_embeddings - 1)
positional_embedding = positional_embedding.to(dtype=query_layer.dtype) # fp16 compatibility
if self.position_embedding_type == "relative_key":
relative_position_scores = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores
elif self.position_embedding_type == "relative_key_query":
relative_position_scores_query = torch.einsum("bhld,lrd->bhlr", query_layer, positional_embedding)
relative_position_scores_key = torch.einsum("bhrd,lrd->bhlr", key_layer, positional_embedding)
attention_scores = attention_scores + relative_position_scores_query + relative_position_scores_key
attention_scores = attention_scores / math.sqrt(self.attention_head_size)
if attention_mask is not None:
# Apply the attention mask is (precomputed for all layers in Data2VecTextModel forward() function)
attention_scores = attention_scores + attention_mask
# Normalize the attention scores to probabilities.
attention_probs = nn.functional.softmax(attention_scores, dim=-1)
# This is actually dropping out entire tokens to attend to, which might
# seem a bit unusual, but is taken from the original Transformer paper.
attention_probs = self.dropout(attention_probs)
# Mask heads if we want to
if head_mask is not None:
attention_probs = attention_probs * head_mask
context_layer = torch.matmul(attention_probs, value_layer)
context_layer = context_layer.permute(0, 2, 1, 3).contiguous()
new_context_layer_shape = context_layer.size()[:-2] + (self.all_head_size,)
context_layer = context_layer.view(new_context_layer_shape)
outputs = (context_layer, attention_probs) if output_attentions else (context_layer,)
if self.is_decoder:
outputs = outputs + (past_key_value,)
return outputs
|
class_definition
| 6,209 | 13,567 | 0 |
/Users/nielsrogge/Documents/python_projecten/transformers/src/transformers/models/data2vec/modeling_data2vec_text.py
| null | 5,399 |
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