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4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-018 [Transcript ID] ENST00000591625 [bp] 599 [Protein] 15aa [Translation ID] ENSP00000467777 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EQD4 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-011 [Transcript ID] ENST00000592033 [bp] 502 [Protein] 38aa [Translation ID] ENSP00000467886 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EIP9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-006 [Transcript ID] ENST00000591811 [bp] 466 [Protein] 38aa [Translation ID] ENSP00000464841 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] K7EIP9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-004 [Transcript ID] ENST00000592228 [bp] 1546 [Protein] 264aa [Translation ID] ENSP00000466743 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] K7EN15 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-012 [Transcript ID] ENST00000591732 [bp] 578 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-025 [Transcript ID] ENST00000592887 [bp] 555 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-013 [Transcript ID] ENST00000587242 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
4bfa4ae9_t__CANT1_003__ENST00000302345___Flags
|
[Name] CANT1-005 [Transcript ID] ENST00000588096 [bp] 369 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: CANT1-003 (ENST00000302345)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000171302;r=17:78991717-79009817;t=ENST00000302345
|
22/1438042990177.43_20150728002310-00087-ip-10-236-191-2_428871243_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-005 [Transcript ID] ENST00000452699 [bp] 3981 [Protein] 1175aa [Translation ID] ENSP00000413307 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44073 [UniProt] Q9NQ11 [RefSeq] NM_001141973 NP_001135445 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-001 [Transcript ID] ENST00000326735 [bp] 3840 [Protein] 1180aa [Translation ID] ENSP00000327214 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS175 [UniProt] Q9NQ11 [RefSeq] NM_022089 NP_071372 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-002 [Transcript ID] ENST00000341676 [bp] 3681 [Protein] 1158aa [Translation ID] ENSP00000341115 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS44072 [UniProt] Q9NQ11 [RefSeq] NM_001141974 NP_001135446 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-201 [Transcript ID] ENST00000617114 [bp] 1723 [Protein] 228aa [Translation ID] ENSP00000478781 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WUM9 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-007 [Transcript ID] ENST00000502418 [bp] 1201 [Protein] 398aa [Translation ID] ENSP00000423065 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y953 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-009 [Transcript ID] ENST00000510069 [bp] 962 [Protein] 321aa [Translation ID] ENSP00000424313 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y9K0 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-014 [Transcript ID] ENST00000503552 [bp] 774 [Protein] 258aa [Translation ID] ENSP00000421126 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y8I1 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-012 [Transcript ID] ENST00000506174 [bp] 573 [Protein] 191aa [Translation ID] ENSP00000424393 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y9K4 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-010 [Transcript ID] ENST00000509619 [bp] 570 [Protein] 191aa [Translation ID] ENSP00000422668 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y8Z6 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-011 [Transcript ID] ENST00000511957 [bp] 569 [Protein] 190aa [Translation ID] ENSP00000427241 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0YAI7 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-008 [Transcript ID] ENST00000508222 [bp] 562 [Protein] 188aa [Translation ID] ENSP00000422227 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y8V5 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-004 [Transcript ID] ENST00000466561 [bp] 1851 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-003 [Transcript ID] ENST00000463860 [bp] 1639 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
|
22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
|
19bd6bb9__ATP13A2_002__ENST00000341676___Flags
|
[Name] ATP13A2-006 [Transcript ID] ENST00000502860 [bp] 687 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
|
Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
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22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
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19bd6bb9__ATP13A2_002__ENST00000341676___Flags
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[Name] ATP13A2-013 [Transcript ID] ENST00000509392 [bp] 572 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
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Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP13A2-002 (ENST00000341676)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000159363;r=1:16985958-17011915;t=ENST00000341676
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22/1438042990177.43_20150728002310-00144-ip-10-236-191-2_427593728_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-002 [Transcript ID] ENST00000327247 [bp] 2387 [Protein] 536aa [Translation ID] ENSP00000314508 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1102 [UniProt] A0A068F658 P04062 [RefSeq] NM_001005741 NM_001005742 NP_001005741 NP_001005742 [Flags]
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Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-001 [Transcript ID] ENST00000368373 [bp] 2276 [Protein] 536aa [Translation ID] ENSP00000357357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1102 [UniProt] A0A068F658 P04062 [RefSeq] NM_000157 NP_000148 [Flags]
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Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-015 [Transcript ID] ENST00000427500 [bp] 2063 [Protein] 487aa [Translation ID] ENSP00000402577 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53374 [UniProt] P04062 [RefSeq] NM_001171812 NP_001165283 [Flags]
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Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-016 [Transcript ID] ENST00000428024 [bp] 1817 [Protein] 449aa [Translation ID] ENSP00000397986 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53373 [UniProt] P04062 [RefSeq] NM_001171811 NP_001165282 [Flags]
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Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-012 [Transcript ID] ENST00000493842 [bp] 1020 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-005 [Transcript ID] ENST00000478472 [bp] 1005 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-010 [Transcript ID] ENST00000491081 [bp] 892 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-013 [Transcript ID] ENST00000473570 [bp] 862 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-009 [Transcript ID] ENST00000460156 [bp] 750 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-006 [Transcript ID] ENST00000484489 [bp] 749 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-007 [Transcript ID] ENST00000497670 [bp] 696 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-014 [Transcript ID] ENST00000467918 [bp] 625 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-003 [Transcript ID] ENST00000464536 [bp] 559 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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06d71d2c_ipt__GBA_016__ENST00000428024___Flags
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[Name] GBA-011 [Transcript ID] ENST00000470104 [bp] 487 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
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Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
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[] |
Ensembl genome browser 81: Homo sapiens - GO table - Transcript: GBA-016 (ENST00000428024)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Ontology/Table?db=core;g=ENSG00000177628;r=1:155204659-155214490;t=ENST00000428024
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22/1438042990177.43_20150728002310-00114-ip-10-236-191-2_438501786_0.json
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2212bb0f_pt__MAPT_002__ENST00000446361___Flags
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[Name] MAPT-203 [Transcript ID] ENST00000344290 [bp] 6816 [Protein] 776aa [Translation ID] ENSP00000340820 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS45715 [UniProt] P10636 [RefSeq] NM_001123066 [Flags]
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Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4
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[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
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22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
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2212bb0f_pt__MAPT_002__ENST00000446361___Flags
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[Name] MAPT-201 [Transcript ID] ENST00000262410 [bp] 6762 [Protein] 758aa [Translation ID] ENSP00000262410 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11501 [UniProt] A0A024R9Y1 P10636 [RefSeq] NM_016835 [Flags]
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Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
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[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
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Flags
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http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
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22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
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2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-204 [Transcript ID] ENST00000351559 [bp] 5811 [Protein] 441aa [Translation ID] ENSP00000303214 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11499 [UniProt] A0A024RA17 P10636 [RefSeq] NM_005910 NP_005901 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
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Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
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2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-202 [Transcript ID] ENST00000340799 [bp] 5724 [Protein] 412aa [Translation ID] ENSP00000340438 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS45716 [UniProt] P10636 [RefSeq] NM_001123067 NP_001116539 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
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Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
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2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-205 [Transcript ID] ENST00000535772 [bp] 5718 [Protein] 410aa [Translation ID] ENSP00000443028 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56033 [UniProt] P10636 [RefSeq] NM_001203251 NM_001203252 NP_001190180 NP_001190181 [Flags]
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Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
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[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-002 [Transcript ID] ENST00000446361 [bp] 5345 [Protein] 383aa [Translation ID] ENSP00000408975 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11500 [UniProt] A0A024R9Y0 P10636 [RefSeq] NM_016834 NP_058518 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
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[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-004 [Transcript ID] ENST00000415613 [bp] 2331 [Protein] 776aa [Translation ID] ENSP00000410838 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS45715 [UniProt] P10636 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL4 - APPRIS candidate principal isoform (longest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-008 [Transcript ID] ENST00000571987 [bp] 2277 [Protein] 758aa [Translation ID] ENSP00000458742 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11501 [UniProt] A0A024R9Y1 P10636 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-007 [Transcript ID] ENST00000574436 [bp] 1326 [Protein] 441aa [Translation ID] ENSP00000460965 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11499 [UniProt] A0A024RA17 P10636 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-003 [Transcript ID] ENST00000420682 [bp] 1239 [Protein] 412aa [Translation ID] ENSP00000413056 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS45716 [UniProt] P10636 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-006 [Transcript ID] ENST00000431008 [bp] 1233 [Protein] 410aa [Translation ID] ENSP00000389250 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56033 [UniProt] P10636 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-001 [Transcript ID] ENST00000334239 [bp] 1107 [Protein] 352aa [Translation ID] ENSP00000334886 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS11502 [UniProt] P10636 [RefSeq] NM_016841 NP_058525 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-009 [Transcript ID] ENST00000576518 [bp] 6778 [Protein] 341aa [Translation ID] ENSP00000458621 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] I3L170 [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-011 [Transcript ID] ENST00000571311 [bp] 544 [Protein] 59aa [Translation ID] ENSP00000460048 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] I3L2Z2 [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-013 [Transcript ID] ENST00000570299 [bp] 889 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-012 [Transcript ID] ENST00000577017 [bp] 142 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-014 [Transcript ID] ENST00000572440 [bp] 5015 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
2212bb0f_pt__MAPT_002__ENST00000446361___Flags
|
[Name] MAPT-010 [Transcript ID] ENST00000576238 [bp] 1065 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: MAPT-002 (ENST00000446361)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000186868;r=17:43971932-44055791;t=ENST00000446361
|
22/1438042990177.43_20150728002310-00200-ip-10-236-191-2_421023175_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-004 [Transcript ID] ENST00000381558 [bp] 1246 [Protein] 250aa [Translation ID] ENSP00000370970 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS41596 [UniProt] P45378 [RefSeq] NM_001042782 NM_001297646 NP_001036247 NP_001284575 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-001 [Transcript ID] ENST00000278317 [bp] 1210 [Protein] 258aa [Translation ID] ENSP00000278317 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS7727 [UniProt] P45378 [RefSeq] NM_006757 NP_006748 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-002 [Transcript ID] ENST00000381589 [bp] 1060 [Protein] 256aa [Translation ID] ENSP00000371001 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS41594 [UniProt] P45378 [RefSeq] NM_001042781 NP_001036246 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-003 [Transcript ID] ENST00000381579 [bp] 1042 [Protein] 250aa [Translation ID] ENSP00000370991 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS41595 [UniProt] P45378 [RefSeq] NM_001042780 NP_001036245 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-006 [Transcript ID] ENST00000381557 [bp] 1019 [Protein] 244aa [Translation ID] ENSP00000370969 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] F8WA37 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5ALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-012 [Transcript ID] ENST00000381563 [bp] 844 [Protein] 261aa [Translation ID] ENSP00000370975 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P45378 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-010 [Transcript ID] ENST00000397301 [bp] 818 [Protein] 269aa [Translation ID] ENSP00000380468 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P45378 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-011 [Transcript ID] ENST00000344578 [bp] 794 [Protein] 245aa [Translation ID] ENSP00000344870 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] P45378 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-014 [Transcript ID] ENST00000397304 [bp] 720 [Protein] 239aa [Translation ID] ENSP00000380471 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H9KVA2 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
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Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
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22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
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4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-015 [Transcript ID] ENST00000446240 [bp] 720 [Protein] 239aa [Translation ID] ENSP00000413203 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JZN9 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
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4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-007 [Transcript ID] ENST00000453458 [bp] 699 [Protein] 208aa [Translation ID] ENSP00000415614 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JCA5 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
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4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-008 [Transcript ID] ENST00000493234 [bp] 1113 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
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4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-009 [Transcript ID] ENST00000492075 [bp] 807 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
|
4a4283e5__Gene__TNNT3__ENSG00000130595___Flags
|
[Name] TNNT3-016 [Transcript ID] ENST00000473100 [bp] 334 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Paralogues - Gene: TNNT3 (ENSG00000130595)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Compara_Paralog?g=ENSG00000130595;r=11:1919562-1938706
|
22/1438042990177.43_20150728002310-00301-ip-10-236-191-2_421448893_0.json
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0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-001 [Transcript ID] ENST00000342085 [bp] 7241 [Protein] 556aa [Translation ID] ENSP00000344220 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10472 [UniProt] O15530 [RefSeq] NM_002613 NP_002604 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
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[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
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0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-002 [Transcript ID] ENST00000268673 [bp] 4728 [Protein] 429aa [Translation ID] ENSP00000268673 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS10473 [UniProt] O15530 [RefSeq] NM_031268 NP_112558 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
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Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
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0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-013 [Transcript ID] ENST00000441549 [bp] 1729 [Protein] 454aa [Translation ID] ENSP00000395357 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS58411 [UniProt] O15530 [RefSeq] NM_001261816 NP_001248745 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-003 [Transcript ID] ENST00000389224 [bp] 2416 [Protein] 529aa [Translation ID] ENSP00000373876 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E9PER6 [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-008 [Transcript ID] ENST00000461815 [bp] 611 [Protein] 149aa [Translation ID] ENSP00000455551 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BQ10 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-015 [Transcript ID] ENST00000566659 [bp] 451 [Protein] 88aa [Translation ID] ENSP00000455492 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H3BPW1 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-006 [Transcript ID] ENST00000474706 [bp] 699 [Protein] 35aa [Translation ID] ENSP00000455025 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BNV5 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-007 [Transcript ID] ENST00000492021 [bp] 552 [Protein] 55aa [Translation ID] ENSP00000455684 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BQA3 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-012 [Transcript ID] ENST00000478708 [bp] 445 [Protein] 40aa [Translation ID] ENSP00000455438 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H3BPR5 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-011 [Transcript ID] ENST00000471311 [bp] 621 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-017 [Transcript ID] ENST00000561962 [bp] 570 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-009 [Transcript ID] ENST00000460496 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-016 [Transcript ID] ENST00000462923 [bp] 550 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-010 [Transcript ID] ENST00000464702 [bp] 511 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-018 [Transcript ID] ENST00000569721 [bp] 330 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-005 [Transcript ID] ENST00000491073 [bp] 2387 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
0292f26d_t__PDPK1_005__ENST00000491073___Flags
|
[Name] PDPK1-014 [Transcript ID] ENST00000570136 [bp] 1125 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Variation image - Transcript: PDPK1-005 (ENST00000491073)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Variation_Transcript/Image?db=core;g=ENSG00000140992;r=16:2588006-2589522;t=ENST00000491073
|
22/1438042990177.43_20150728002310-00284-ip-10-236-191-2_420918338_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-008 [Transcript ID] ENST00000510168 [bp] 5067 [Protein] 919aa [Translation ID] ENSP00000427461 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46914 [UniProt] P98194 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-001 [Transcript ID] ENST00000508532 [bp] 4969 [Protein] 919aa [Translation ID] ENSP00000424783 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46914 [UniProt] P98194 [RefSeq] NM_001199179 NP_001186108 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-009 [Transcript ID] ENST00000505330 [bp] 4888 [Protein] 953aa [Translation ID] ENSP00000423774 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75006 [UniProt] B4E2Q0 [RefSeq] NM_001199181 NP_001186110 [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-011 [Transcript ID] ENST00000428331 [bp] 4795 [Protein] 919aa [Translation ID] ENSP00000395809 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46914 [UniProt] P98194 [RefSeq] NM_014382 NP_055197 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-004 [Transcript ID] ENST00000504948 [bp] 4714 [Protein] 903aa [Translation ID] ENSP00000423330 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56281 [UniProt] P98194 [RefSeq] NM_001199184 NP_001186113 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-201 [Transcript ID] ENST00000533801 [bp] 3690 [Protein] 888aa [Translation ID] ENSP00000432956 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46913 [UniProt] P98194 [RefSeq] NM_001001485 NP_001001485 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-010 [Transcript ID] ENST00000507488 [bp] 3579 [Protein] 973aa [Translation ID] ENSP00000421326 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56278 [UniProt] P98194 [RefSeq] NM_001199180 NP_001186109 [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-007 [Transcript ID] ENST00000504381 [bp] 3498 [Protein] 944aa [Translation ID] ENSP00000425320 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56279 [UniProt] P98194 [RefSeq] NM_001199182 NP_001186111 [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-002 [Transcript ID] ENST00000328560 [bp] 3484 [Protein] 888aa [Translation ID] ENSP00000329664 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46913 [UniProt] P98194 [RefSeq] NM_001199185 NP_001186114 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-003 [Transcript ID] ENST00000513801 [bp] 3439 [Protein] 923aa [Translation ID] ENSP00000422872 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56280 [UniProt] P98194 [RefSeq] NM_001199183 NP_001186112 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-005 [Transcript ID] ENST00000359644 [bp] 3401 [Protein] 949aa [Translation ID] ENSP00000352665 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS33856 [UniProt] P98194 [RefSeq] NM_001001486 NP_001001486 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-020 [Transcript ID] ENST00000422190 [bp] 3386 [Protein] 939aa [Translation ID] ENSP00000402677 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS46912 [UniProt] P98194 [RefSeq] NM_001001487 NP_001001487 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-006 [Transcript ID] ENST00000504612 [bp] 3148 [Protein] 903aa [Translation ID] ENSP00000425228 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y9V7 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
2a1a49bd___ATP2C1_004__ENST00000504948___Flags
|
[Name] ATP2C1-017 [Transcript ID] ENST00000508660 [bp] 943 [Protein] 314aa [Translation ID] ENSP00000424930 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] H0Y9S7 [RefSeq] - [Flags]
|
5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: ATP2C1-004 (ENST00000504948)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?g=ENSG00000017260;r=3:130894178-131003150;t=ENST00000504948
|
22/1438043062635.98_20150728002422-00256-ip-10-236-191-2_427363529_0.json
|
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