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"""Functions for computing dominating sets in a graph.""" |
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import math |
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from heapq import heappop, heappush |
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from itertools import chain, count |
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import networkx as nx |
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__all__ = [ |
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"dominating_set", |
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"is_dominating_set", |
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"connected_dominating_set", |
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"is_connected_dominating_set", |
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] |
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@nx._dispatchable |
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def dominating_set(G, start_with=None): |
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r"""Finds a dominating set for the graph G. |
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A *dominating set* for a graph with node set *V* is a subset *D* of |
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*V* such that every node not in *D* is adjacent to at least one |
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member of *D* [1]_. |
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Parameters |
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---------- |
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G : NetworkX graph |
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start_with : node (default=None) |
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Node to use as a starting point for the algorithm. |
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Returns |
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------- |
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D : set |
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A dominating set for G. |
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Notes |
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----- |
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This function is an implementation of algorithm 7 in [2]_ which |
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finds some dominating set, not necessarily the smallest one. |
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See also |
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-------- |
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is_dominating_set |
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References |
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---------- |
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.. [1] https://en.wikipedia.org/wiki/Dominating_set |
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.. [2] Abdol-Hossein Esfahanian. Connectivity Algorithms. |
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http://www.cse.msu.edu/~cse835/Papers/Graph_connectivity_revised.pdf |
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""" |
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all_nodes = set(G) |
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if start_with is None: |
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start_with = nx.utils.arbitrary_element(all_nodes) |
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if start_with not in G: |
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raise nx.NetworkXError(f"node {start_with} is not in G") |
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dominating_set = {start_with} |
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dominated_nodes = set(G[start_with]) |
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remaining_nodes = all_nodes - dominated_nodes - dominating_set |
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while remaining_nodes: |
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v = remaining_nodes.pop() |
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undominated_nbrs = set(G[v]) - dominating_set |
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dominating_set.add(v) |
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dominated_nodes |= undominated_nbrs |
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remaining_nodes -= undominated_nbrs |
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return dominating_set |
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@nx._dispatchable |
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def is_dominating_set(G, nbunch): |
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"""Checks if `nbunch` is a dominating set for `G`. |
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A *dominating set* for a graph with node set *V* is a subset *D* of |
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*V* such that every node not in *D* is adjacent to at least one |
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member of *D* [1]_. |
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Parameters |
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---------- |
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G : NetworkX graph |
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nbunch : iterable |
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An iterable of nodes in the graph `G`. |
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Returns |
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------- |
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dominating : bool |
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True if `nbunch` is a dominating set of `G`, false otherwise. |
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See also |
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-------- |
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dominating_set |
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References |
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---------- |
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.. [1] https://en.wikipedia.org/wiki/Dominating_set |
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""" |
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testset = {n for n in nbunch if n in G} |
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nbrs = set(chain.from_iterable(G[n] for n in testset)) |
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return len(set(G) - testset - nbrs) == 0 |
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@nx.utils.not_implemented_for("directed") |
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@nx._dispatchable |
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def connected_dominating_set(G): |
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"""Returns a connected dominating set. |
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A *dominating set* for a graph *G* with node set *V* is a subset *D* of *V* |
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such that every node not in *D* is adjacent to at least one member of *D* |
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[1]_. A *connected dominating set* is a dominating set *C* that induces a |
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connected subgraph of *G* [2]_. |
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Note that connected dominating sets are not unique in general and that there |
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may be other connected dominating sets. |
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Parameters |
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---------- |
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G : NewtorkX graph |
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Undirected connected graph. |
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Returns |
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------- |
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connected_dominating_set : set |
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A dominating set of nodes which induces a connected subgraph of G. |
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Raises |
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------ |
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NetworkXNotImplemented |
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If G is directed. |
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NetworkXError |
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If G is disconnected. |
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Examples |
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________ |
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>>> G = nx.Graph( |
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... [ |
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... (1, 2), |
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... (1, 3), |
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... (1, 4), |
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... (1, 5), |
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... (1, 6), |
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... (2, 7), |
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... (3, 8), |
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... (4, 9), |
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... (5, 10), |
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... (6, 11), |
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... (7, 12), |
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... (8, 12), |
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... (9, 12), |
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... (10, 12), |
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... (11, 12), |
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... ] |
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... ) |
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>>> nx.connected_dominating_set(G) |
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{1, 2, 3, 4, 5, 6, 7} |
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Notes |
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----- |
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This function implements Algorithm I in its basic version as described |
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in [3]_. The idea behind the algorithm is the following: grow a tree *T*, |
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starting from a node with maximum degree. Throughout the growing process, |
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nonleaf nodes in *T* are our connected dominating set (CDS), leaf nodes in |
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*T* are marked as "seen" and nodes in G that are not yet in *T* are marked as |
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"unseen". We maintain a max-heap of all "seen" nodes, and track the number |
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of "unseen" neighbors for each node. At each step we pop the heap top -- a |
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"seen" (leaf) node with maximal number of "unseen" neighbors, add it to the |
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CDS and mark all its "unseen" neighbors as "seen". For each one of the newly |
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created "seen" nodes, we also decrement the number of "unseen" neighbors for |
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all its neighbors. The algorithm terminates when there are no more "unseen" |
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nodes. |
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Runtime complexity of this implementation is $O(|E|*log|V|)$ (amortized). |
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References |
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---------- |
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.. [1] https://en.wikipedia.org/wiki/Dominating_set |
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.. [2] https://en.wikipedia.org/wiki/Connected_dominating_set |
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.. [3] Guha, S. and Khuller, S. |
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*Approximation Algorithms for Connected Dominating Sets*, |
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Algorithmica, 20, 374-387, 1998. |
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""" |
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if len(G) == 0: |
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return set() |
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if not nx.is_connected(G): |
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raise nx.NetworkXError("G must be a connected graph") |
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if len(G) == 1: |
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return set(G) |
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G_succ = G._adj |
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c = count() |
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unseen_degree = dict(G.degree) |
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(max_deg_node, max_deg) = max(unseen_degree.items(), key=lambda x: x[1]) |
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for nbr in G_succ[max_deg_node]: |
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unseen_degree[nbr] -= 1 |
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unseen = set(G) - {max_deg_node} |
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seen = [(-max_deg, next(c), max_deg_node)] |
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connected_dominating_set = set() |
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while unseen: |
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(neg_deg, cnt, u) = heappop(seen) |
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if -neg_deg > unseen_degree[u]: |
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heappush(seen, (-unseen_degree[u], cnt, u)) |
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continue |
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for v in G_succ[u]: |
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if v in unseen: |
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unseen.remove(v) |
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for nbr in G_succ[v]: |
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unseen_degree[nbr] -= 1 |
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heappush(seen, (-unseen_degree[v], next(c), v)) |
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connected_dominating_set.add(u) |
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return connected_dominating_set |
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@nx.utils.not_implemented_for("directed") |
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@nx._dispatchable |
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def is_connected_dominating_set(G, nbunch): |
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"""Checks if `nbunch` is a connected dominating set for `G`. |
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A *dominating set* for a graph *G* with node set *V* is a subset *D* of |
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*V* such that every node not in *D* is adjacent to at least one |
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member of *D* [1]_. A *connected dominating set* is a dominating |
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set *C* that induces a connected subgraph of *G* [2]_. |
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Parameters |
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---------- |
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G : NetworkX graph |
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Undirected graph. |
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nbunch : iterable |
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An iterable of nodes in the graph `G`. |
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Returns |
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------- |
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connected_dominating : bool |
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True if `nbunch` is connected dominating set of `G`, false otherwise. |
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References |
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---------- |
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.. [1] https://en.wikipedia.org/wiki/Dominating_set |
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.. [2] https://en.wikipedia.org/wiki/Connected_dominating_set |
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""" |
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return nx.is_dominating_set(G, nbunch) and nx.is_connected(nx.subgraph(G, nbunch)) |
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