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ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-001 [Transcript ID] ENST00000523629 [bp] 7537 [Protein] 604aa [Translation ID] ENSP00000428543 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS6256 [UniProt] Q06455 [RefSeq] NM_175634 NP_783552 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-205 [Transcript ID] ENST00000614812 [bp] 7483 [Protein] 604aa [Translation ID] ENSP00000481315 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS6256 [UniProt] Q06455 [RefSeq] NM_001198631 NP_001185560 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-202 [Transcript ID] ENST00000436581 [bp] 7454 [Protein] 663aa [Translation ID] ENSP00000402257 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75766 [UniProt] A0A0A0MSU1 [RefSeq] NM_001198679 NP_001185608 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-204 [Transcript ID] ENST00000613886 [bp] 7401 [Protein] 577aa [Translation ID] ENSP00000478331 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS47891 [UniProt] Q06455 [RefSeq] NM_001198632 NP_001185561 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-206 [Transcript ID] ENST00000615601 [bp] 7372 [Protein] 584aa [Translation ID] ENSP00000480500 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS75767 [UniProt] A0A087WWT6 [RefSeq] NM_001198633 NP_001185562 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-201 [Transcript ID] ENST00000265814 [bp] 7284 [Protein] 604aa [Translation ID] ENSP00000265814 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS6256 [UniProt] Q06455 [RefSeq] NM_001198628 NP_001185557 [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-002 [Transcript ID] ENST00000396218 [bp] 3463 [Protein] 577aa [Translation ID] ENSP00000379520 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS47891 [UniProt] Q06455 [RefSeq] NM_004349 NP_004340 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-010 [Transcript ID] ENST00000518844 [bp] 2453 [Protein] 577aa [Translation ID] ENSP00000430728 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS47891 [UniProt] Q06455 [RefSeq] NM_001198625 NP_001185554 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-004 [Transcript ID] ENST00000422361 [bp] 2450 [Protein] 567aa [Translation ID] ENSP00000390137 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS6257 [UniProt] Q06455 W8FW32 [RefSeq] NM_175636 NP_783554 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-009 [Transcript ID] ENST00000360348 [bp] 2370 [Protein] 567aa [Translation ID] ENSP00000353504 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS6257 [UniProt] Q06455 W8FW32 [RefSeq] NM_175635 NP_783553 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-011 [Transcript ID] ENST00000520724 [bp] 2103 [Protein] 615aa [Translation ID] ENSP00000428742 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS56544 [UniProt] Q06455 [RefSeq] NM_001198634 NP_001185563 [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-006 [Transcript ID] ENST00000521553 [bp] 1346 [Protein] 210aa [Translation ID] ENSP00000429728 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RHJ8 [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-018 [Transcript ID] ENST00000519847 [bp] 1044 [Protein] 169aa [Translation ID] ENSP00000430204 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EWJ9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-042 [Transcript ID] ENST00000518992 [bp] 976 [Protein] 229aa [Translation ID] ENSP00000431094 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7ETA8 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-019 [Transcript ID] ENST00000517919 [bp] 782 [Protein] 135aa [Translation ID] ENSP00000429506 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EQW7 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-032 [Transcript ID] ENST00000521319 [bp] 730 [Protein] 89aa [Translation ID] ENSP00000429137 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RJB3 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-017 [Transcript ID] ENST00000522467 [bp] 690 [Protein] 156aa [Translation ID] ENSP00000429532 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EQW3 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-031 [Transcript ID] ENST00000521375 [bp] 596 [Protein] 94aa [Translation ID] ENSP00000429666 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EQI9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-012 [Transcript ID] ENST00000518832 [bp] 591 [Protein] 46aa [Translation ID] ENSP00000429864 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RH72 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-040 [Transcript ID] ENST00000521054 [bp] 585 [Protein] 171aa [Translation ID] ENSP00000427763 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RG85 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-033 [Transcript ID] ENST00000518317 [bp] 574 [Protein] 69aa [Translation ID] ENSP00000429062 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RJE7 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-041 [Transcript ID] ENST00000520556 [bp] 574 [Protein] 91aa [Translation ID] ENSP00000428100 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RK76 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-025 [Transcript ID] ENST00000520583 [bp] 573 [Protein] 120aa [Translation ID] ENSP00000430070 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A0A6YYQ5 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-039 [Transcript ID] ENST00000521733 [bp] 572 [Protein] 101aa [Translation ID] ENSP00000430637 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RJ32 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-020 [Transcript ID] ENST00000520974 [bp] 564 [Protein] 85aa [Translation ID] ENSP00000429375 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7ERJ9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-029 [Transcript ID] ENST00000518823 [bp] 556 [Protein] 79aa [Translation ID] ENSP00000428475 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RI38 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-016 [Transcript ID] ENST00000523168 [bp] 553 [Protein] 120aa [Translation ID] ENSP00000429118 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7ESA9 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-030 [Transcript ID] ENST00000518449 [bp] 553 [Protein] 58aa [Translation ID] ENSP00000428133 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EV92 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-028 [Transcript ID] ENST00000518954 [bp] 548 [Protein] 54aa [Translation ID] ENSP00000430080 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EX23 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-038 [Transcript ID] ENST00000517792 [bp] 548 [Protein] 120aa [Translation ID] ENSP00000429940 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RH30 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-023 [Transcript ID] ENST00000519061 [bp] 544 [Protein] 26aa [Translation ID] ENSP00000430334 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E5RFQ3 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-034 [Transcript ID] ENST00000520428 [bp] 491 [Protein] 48aa [Translation ID] ENSP00000429857 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] E7EQ59 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-043 [Transcript ID] ENST00000520978 [bp] 882 [Protein] 30aa [Translation ID] ENSP00000429085 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H0YBA6 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-008 [Transcript ID] ENST00000521751 [bp] 870 [Protein] 127aa [Translation ID] ENSP00000430778 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H0YC25 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-022 [Transcript ID] ENST00000519422 [bp] 630 [Protein] 36aa [Translation ID] ENSP00000429587 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] E7EQJ1 [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-015 [Transcript ID] ENST00000519577 [bp] 586 [Protein] 36aa [Translation ID] ENSP00000430084 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] E7EQJ1 [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-014 [Transcript ID] ENST00000524215 [bp] 565 [Protein] 68aa [Translation ID] ENSP00000429034 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] E7ESL1 [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-027 [Transcript ID] ENST00000521897 [bp] 557 [Protein] 36aa [Translation ID] ENSP00000429653 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] E7EQJ1 [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-045 [Transcript ID] ENST00000518361 [bp] 431 [Protein] 31aa [Translation ID] ENSP00000430863 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H0YC43 [RefSeq] - [Flags]
|
5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-026 [Transcript ID] ENST00000517493 [bp] 708 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-003 [Transcript ID] ENST00000522163 [bp] 631 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-036 [Transcript ID] ENST00000520172 [bp] 569 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-037 [Transcript ID] ENST00000518256 [bp] 563 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-021 [Transcript ID] ENST00000522860 [bp] 547 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-035 [Transcript ID] ENST00000522065 [bp] 542 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-024 [Transcript ID] ENST00000521902 [bp] 535 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-013 [Transcript ID] ENST00000522316 [bp] 504 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 4, for transcripts supported by an EST flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:4
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-005 [Transcript ID] ENST00000523290 [bp] 2061 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-007 [Transcript ID] ENST00000520047 [bp] 1872 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
ea7181ad__RUNX1T1_001__ENST00000523629___Flags
|
[Name] RUNX1T1-044 [Transcript ID] ENST00000521078 [bp] 781 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Homo sapiens - Protein summary - Transcript: RUNX1T1-001 (ENST00000523629)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/ProteinSummary?db=core;g=ENSG00000079102;r=8:91954975-92103226;t=ENST00000523629
|
16/1438042987866.61_20150728002307-00125-ip-10-236-191-2_442146660_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-001 [Transcript ID] ENST00000303391 [bp] 10505 [Protein] 486aa [Translation ID] ENSP00000301948 [CCDS] CCDS14741 [UniProt] D3YJ43 P51608 [RefSeq] NM_004992 NP_004983 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-002 [Transcript ID] ENST00000453960 [bp] 1729 [Protein] 498aa [Translation ID] ENSP00000395535 [CCDS] CCDS48193 [UniProt] P51608 [RefSeq] NM_001110792 NP_001104262 [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-202 [Transcript ID] ENST00000619732 [bp] 10237 [Protein] 509aa [Translation ID] ENSP00000480973 [CCDS] - [UniProt] A0A087WXF0 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-005 [Transcript ID] ENST00000628176 [bp] 1712 [Protein] 172aa [Translation ID] ENSP00000486978 [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-019 [Transcript ID] ENST00000407218 [bp] 1174 [Protein] 184aa [Translation ID] ENSP00000384865 [CCDS] - [UniProt] B5MCB4 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-203 [Transcript ID] ENST00000622433 [bp] 1071 [Protein] 324aa [Translation ID] ENSP00000484470 [CCDS] - [UniProt] A0A087X1U4 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-201 [Transcript ID] ENST00000611468 [bp] 603 [Protein] 168aa [Translation ID] ENSP00000479736 [CCDS] - [UniProt] A0A087WVW7 [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-008 [Transcript ID] ENST00000415944 [bp] 413 [Protein] 50aa [Translation ID] ENSP00000416267 [CCDS] - [UniProt] C9JH89 [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-017 [Transcript ID] ENST00000630151 [bp] 261 [Protein] 41aa [Translation ID] ENSP00000486089 [CCDS] - [UniProt] - [RefSeq] - [Flags] 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Genes and/or transcript that contains an open reading frame (ORF).Protein coding
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-003 [Transcript ID] ENST00000369957 [bp] 784 [Protein] 37aa [Translation ID] ENSP00000358973 [CCDS] - [UniProt] H7BY72 [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-012 [Transcript ID] ENST00000460227 [bp] 1298 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-010 [Transcript ID] ENST00000488293 [bp] 1198 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-011 [Transcript ID] ENST00000463644 [bp] 1088 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-020 [Transcript ID] ENST00000626422 [bp] 835 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-018 [Transcript ID] ENST00000627864 [bp] 581 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-015 [Transcript ID] ENST00000631210 [bp] 490 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-021 [Transcript ID] ENST00000625300 [bp] 350 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-006 [Transcript ID] ENST00000496908 [bp] 342 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1 [Biotype]
|
Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-004 [Transcript ID] ENST00000486506 [bp] 2907 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-016 [Transcript ID] ENST00000629277 [bp] 2558 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
e3c41179__Gene__MECP2__ENSG00000169057___Biotype
|
[Name] MECP2-013 [Transcript ID] ENST00000481807 [bp] 436 [Protein] No protein [Translation ID] - [CCDS] - [UniProt] - [RefSeq] - [Flags] Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3 [Biotype]
|
Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Biotype
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-001 [Transcript ID] ENST00000303391 [bp] 10505 [Protein] 486aa [Translation ID] ENSP00000301948 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS14741 [UniProt] D3YJ43 P51608 [RefSeq] NM_004992 NP_004983 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-002 [Transcript ID] ENST00000453960 [bp] 1729 [Protein] 498aa [Translation ID] ENSP00000395535 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS48193 [UniProt] P51608 [RefSeq] NM_001110792 NP_001104262 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE2 - APPRIS candidate principal isoform that appears to be conserved in fewer than three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT2
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-202 [Transcript ID] ENST00000619732 [bp] 10237 [Protein] 509aa [Translation ID] ENSP00000480973 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WXF0 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-005 [Transcript ID] ENST00000628176 [bp] 1712 [Protein] 172aa [Translation ID] ENSP00000486978 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-019 [Transcript ID] ENST00000407218 [bp] 1174 [Protein] 184aa [Translation ID] ENSP00000384865 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] B5MCB4 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-203 [Transcript ID] ENST00000622433 [bp] 1071 [Protein] 324aa [Translation ID] ENSP00000484470 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087X1U4 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-201 [Transcript ID] ENST00000611468 [bp] 603 [Protein] 168aa [Translation ID] ENSP00000479736 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] A0A087WVW7 [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-008 [Transcript ID] ENST00000415944 [bp] 413 [Protein] 50aa [Translation ID] ENSP00000416267 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] C9JH89 [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-017 [Transcript ID] ENST00000630151 [bp] 261 [Protein] 41aa [Translation ID] ENSP00000486089 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incompleteTranscript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-003 [Transcript ID] ENST00000369957 [bp] 784 [Protein] 37aa [Translation ID] ENSP00000358973 [Biotype] Transcript is thought to undergo nonsense mediated decay, a process which detects nonsense mutations and prevents the expression of truncated or erroneous proteins. Nonsense mediated decay [CCDS] - [UniProt] H7BY72 [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-012 [Transcript ID] ENST00000460227 [bp] 1298 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-010 [Transcript ID] ENST00000488293 [bp] 1198 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-011 [Transcript ID] ENST00000463644 [bp] 1088 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-020 [Transcript ID] ENST00000626422 [bp] 835 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-018 [Transcript ID] ENST00000627864 [bp] 581 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-015 [Transcript ID] ENST00000631210 [bp] 490 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-021 [Transcript ID] ENST00000625300 [bp] 350 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-006 [Transcript ID] ENST00000496908 [bp] 342 [Protein] No protein [Translation ID] - [Biotype] Transcripts that don't contain an open reading frame (ORF) and cannot be placed in one of the other categories.Processed transcript [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-004 [Transcript ID] ENST00000486506 [bp] 2907 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 5, for transcripts that are not supported at all by either an mRNA or an EST.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:5
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-016 [Transcript ID] ENST00000629277 [bp] 2558 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level Not Analysed. Pseudogenes, single exon transcripts, HLA, T-cell receptor and Ig transcripts are not analysed and therefore not given any of the TSL categories.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:NA
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
c928451a__Gene__MECP2__ENSG00000169057___Flags
|
[Name] MECP2-013 [Transcript ID] ENST00000481807 [bp] 436 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 3, when transcripts are supported by a single EST only.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:3
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Gene: MECP2 (ENSG00000169057)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Gene/Summary?db=core;g=ENSG00000169057;r=X:154021573-154137103
|
16/1438042988312.76_20150728002308-00003-ip-10-236-191-2_436929916_0.json
|
60fd4b4f_Gene__Dcx__ENSMUSG00000031285___Flags
|
[Name] Dcx-001 [Transcript ID] ENSMUST00000033642 [bp] 9074 [Protein] 366aa [Translation ID] ENSMUSP00000033642 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53209 [UniProt] O88809 [RefSeq] NM_001110223 NP_001103693 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Dcx (ENSMUSG00000031285)
|
Flags
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g=ENSMUSG00000031285;r=X:143855842-143933311
|
16/1438042988312.76_20150728002308-00060-ip-10-236-191-2_440502188_0.json
|
60fd4b4f_Gene__Dcx__ENSMUSG00000031285___Flags
|
[Name] Dcx-002 [Transcript ID] ENSMUST00000112851 [bp] 4095 [Protein] 365aa [Translation ID] ENSMUSP00000108472 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53210 [UniProt] Q6PGI2 [RefSeq] NM_001110224 NP_001103694 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Dcx (ENSMUSG00000031285)
|
Flags
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g=ENSMUSG00000031285;r=X:143855842-143933311
|
16/1438042988312.76_20150728002308-00060-ip-10-236-191-2_440502188_0.json
|
60fd4b4f_Gene__Dcx__ENSMUSG00000031285___Flags
|
[Name] Dcx-003 [Transcript ID] ENSMUST00000087313 [bp] 3120 [Protein] 366aa [Translation ID] ENSMUSP00000084570 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53209 [UniProt] O88809 [RefSeq] NM_001110222 NP_001103692 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicALTERNATIVE1 - APPRIS candidate principal isoform that is conserved in at least three tested non-primate species.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS ALT1
|
[] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Dcx (ENSMUSG00000031285)
|
Flags
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g=ENSMUSG00000031285;r=X:143855842-143933311
|
16/1438042988312.76_20150728002308-00060-ip-10-236-191-2_440502188_0.json
|
60fd4b4f_Gene__Dcx__ENSMUSG00000031285___Flags
|
[Name] Dcx-006 [Transcript ID] ENSMUST00000112856 [bp] 1333 [Protein] 360aa [Translation ID] ENSMUSP00000108477 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS41157 [UniProt] Q9CXL6 [RefSeq] NM_010025 NP_034155 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL3 - APPRIS candidate principal isoform (earliest CCDS).APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P3
|
[] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Dcx (ENSMUSG00000031285)
|
Flags
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g=ENSMUSG00000031285;r=X:143855842-143933311
|
16/1438042988312.76_20150728002308-00060-ip-10-236-191-2_440502188_0.json
|
60fd4b4f_Gene__Dcx__ENSMUSG00000031285___Flags
|
[Name] Dcx-004 [Transcript ID] ENSMUST00000125768 [bp] 3194 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Dcx (ENSMUSG00000031285)
|
Flags
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g=ENSMUSG00000031285;r=X:143855842-143933311
|
16/1438042988312.76_20150728002308-00060-ip-10-236-191-2_440502188_0.json
|
60fd4b4f_Gene__Dcx__ENSMUSG00000031285___Flags
|
[Name] Dcx-005 [Transcript ID] ENSMUST00000139920 [bp] 2617 [Protein] No protein [Translation ID] - [Biotype] Alternatively spliced transcript that is believed to contain intronic sequence relative to other coding transcripts in a given locus.Retained intron [CCDS] - [UniProt] - [RefSeq] - [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2
|
[] |
Ensembl genome browser 81: Mus musculus - Summary - Gene: Dcx (ENSMUSG00000031285)
|
Flags
|
http://www.ensembl.org/Mus_musculus/Gene/Summary?db=core;g=ENSMUSG00000031285;r=X:143855842-143933311
|
16/1438042988312.76_20150728002308-00060-ip-10-236-191-2_440502188_0.json
|
b3b225e9_pt__NCF2_001__ENST00000367536___Flags
|
[Name] NCF2-201 [Transcript ID] ENST00000413720 [bp] 2276 [Protein] 481aa [Translation ID] ENSP00000399294 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS53447 [UniProt] P19878 [RefSeq] NM_001190794 NP_001177723 [Flags]
|
Transcript Support Level 2, when transcripts are supported by multiple ESTs or by an mRNA flagged as suspect.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:2The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NCF2-001 (ENST00000367536)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116701;r=1:183555563-183590876;t=ENST00000367536
|
16/1438042988312.76_20150728002308-00144-ip-10-236-191-2_424751689_0.json
|
b3b225e9_pt__NCF2_001__ENST00000367536___Flags
|
[Name] NCF2-002 [Transcript ID] ENST00000367535 [bp] 2226 [Protein] 526aa [Translation ID] ENSP00000356505 [Biotype] Genes and/or transcript that contains an open reading frame (ORF).Protein coding [CCDS] CCDS1356 [UniProt] P19878 [RefSeq] NM_000433 NP_000424 [Flags]
|
Transcript Support Level 1, when transcripts are supported by at least one non-suspect mRNA.The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users. The method relies on the primary data that can support full-length transcript structure: mRNA and EST alignments supplied by UCSC and Ensembl.TSL:1The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basicPRINCIPAL1 - APPRIS candidate principal isoform.APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods.APPRIS P1
|
[] |
Ensembl genome browser 81: Homo sapiens - Summary - Transcript: NCF2-001 (ENST00000367536)
|
Flags
|
http://www.ensembl.org/Homo_sapiens/Transcript/Summary?db=core;g=ENSG00000116701;r=1:183555563-183590876;t=ENST00000367536
|
16/1438042988312.76_20150728002308-00144-ip-10-236-191-2_424751689_0.json
|
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