Spaces:
Running
Running
Commit
·
d0785b4
1
Parent(s):
f1710dc
try to fix the plotly issue
Browse files- app/main.py +3 -5
app/main.py
CHANGED
@@ -2,9 +2,9 @@
|
|
2 |
from pathlib import Path
|
3 |
|
4 |
SETTINGS = {
|
5 |
-
"annotation_dir":
|
6 |
-
"genome_dir":
|
7 |
-
"cache_dir":
|
8 |
}
|
9 |
|
10 |
from gcell._settings import update_settings
|
@@ -19,9 +19,7 @@ from gcell.config.config import load_config
|
|
19 |
from gcell.dna.nr_motif_v1 import NrMotifV1
|
20 |
from gcell.protein.af2 import AFPairseg
|
21 |
from gcell.utils.pdb_viewer import view_pdb_html
|
22 |
-
from genomespy import GenomeSpy
|
23 |
|
24 |
-
gs = GenomeSpy()
|
25 |
|
26 |
cfg = load_config("s3_interpret")
|
27 |
plt.rcParams["figure.dpi"] = 100
|
|
|
2 |
from pathlib import Path
|
3 |
|
4 |
SETTINGS = {
|
5 |
+
"annotation_dir": "/app/.gcell_data/annotations",
|
6 |
+
"genome_dir": "/app/.gcell_data/genomes",
|
7 |
+
"cache_dir": "/app/.gcell_data/cache",
|
8 |
}
|
9 |
|
10 |
from gcell._settings import update_settings
|
|
|
19 |
from gcell.dna.nr_motif_v1 import NrMotifV1
|
20 |
from gcell.protein.af2 import AFPairseg
|
21 |
from gcell.utils.pdb_viewer import view_pdb_html
|
|
|
22 |
|
|
|
23 |
|
24 |
cfg = load_config("s3_interpret")
|
25 |
plt.rcParams["figure.dpi"] = 100
|