Update app_logic.py

app_logic.py

@@ -62,8 +62,8 @@ def process_commented_markdown(lines):
     """Process a commented markdown string by stripping '# ' from each line if any line starts with '# # Space:'."""
     if any(line.strip().startswith("# ## File Structure") for line in lines):
         cleaned_lines = [line.lstrip("# ") for line in lines]
-        return "\n".join(cleaned_lines)
-    return commented_input
+        return cleaned_lines
+    return lines
 
 
 # --- `parse_markdown` (Unchanged from previous corrected version) ---
@@ -72,7 +72,7 @@ def parse_markdown(markdown_input):
     current_file_path = None; current_file_content_lines = []
     in_file_definition = False; in_code_block = False
     lines = markdown_clean.strip().split("\n")
-    markdown_clean = process_commented_markdown(lines)
+    lines = process_commented_markdown(lines)
     
     for line_content_orig in lines:
         line_content_stripped = line_content_orig.strip()