WebashalarForML commited on
Commit
eb12761
·
verified ·
1 Parent(s): a35c9e2

Update app.py

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Files changed (1) hide show
  1. app.py +57 -28
app.py CHANGED
@@ -248,37 +248,66 @@ def chat():
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  }
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  return jsonify(response_payload)
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- if patient_id and patient_id_str.strip() != "":
 
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  patient_folder = REPORTS_ROOT / f"{patient_id}"
 
 
 
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  if patient_folder.exists() and patient_folder.is_dir():
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- for fname in sorted(os.listdir(patient_folder)):
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- file_path = patient_folder / fname
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- page_text = ""
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- if partition_pdf is not None and str(file_path).lower().endswith('.pdf'):
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- try:
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- elements = partition_pdf(filename=str(file_path))
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- page_text = "\n".join([el.text for el in elements if hasattr(el, 'text') and el.text])
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- except Exception:
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- logger.exception("Failed to parse PDF %s", file_path)
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- else:
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- try:
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- page_text = file_path.read_text(encoding='utf-8', errors='ignore')
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- except Exception:
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- page_text = ""
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-
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- if page_text:
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- cleaned = clean_notes_with_bloatectomy(page_text, style="remov")
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- if cleaned:
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- combined_text_parts.append(cleaned)
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-
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- base_summary = state.get("conversationSummary", "") or ""
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- docs_summary = "\n\n".join(combined_text_parts)
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- if docs_summary:
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- state["conversationSummary"] = (base_summary + "\n\n" + docs_summary).strip()
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- else:
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- state["conversationSummary"] = base_summary
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
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- if patient_id and patient_id_str.strip() != "":
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  action_hint = f"Use the patient ID {patient_id} to retrieve and summarize any relevant reports."
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  else:
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  action_hint = "No PID provided and the user's request does not need prior records. Provide helpful, general medical guidance and offer to retrieve records if the user later supplies a PID."
 
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  }
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  return jsonify(response_payload)
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+ # If we have a patient_id, check for files — if none, return a clear assistant reply.
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+ if patient_id and str(patient_id).strip() != "":
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  patient_folder = REPORTS_ROOT / f"{patient_id}"
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+
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+ # If folder does not exist or contains no allowed files, short-circuit with a friendly LLM-like reply.
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+ has_allowed_files = False
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  if patient_folder.exists() and patient_folder.is_dir():
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+ for f in patient_folder.iterdir():
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+ if f.is_file():
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+ ext = f.suffix.lower().lstrip(".")
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+ if ext in ALLOWED_EXTENSIONS:
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+ has_allowed_files = True
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+ break
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+
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+ if not has_allowed_files:
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+ # update state so caller knows we checked and found nothing
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+ state.setdefault("patientDetails", {})["pid"] = str(patient_id)
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+ state["no_records_found"] = True
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+ # Optionally append to conversationSummary to keep a trace
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+ base_summary = state.get("conversationSummary", "") or ""
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+ note = f"No medical records found for patient ID {patient_id}."
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+ state["conversationSummary"] = (base_summary + "\n\n" + note).strip()
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+
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+ assistant_reply = f"No medical records are available for patient ID {patient_id}."
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+ response_payload = {
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+ "assistant_reply": assistant_reply,
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+ "updated_state": state,
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+ }
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+ return jsonify(response_payload)
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+
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+ # If we do have files, proceed to read them (existing behavior)
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+ for fname in sorted(os.listdir(patient_folder)):
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+ file_path = patient_folder / fname
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+ page_text = ""
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+ if partition_pdf is not None and str(file_path).lower().endswith('.pdf'):
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+ try:
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+ elements = partition_pdf(filename=str(file_path))
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+ page_text = "\n".join([el.text for el in elements if hasattr(el, 'text') and el.text])
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+ except Exception:
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+ logger.exception("Failed to parse PDF %s", file_path)
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+ else:
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+ try:
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+ page_text = file_path.read_text(encoding='utf-8', errors='ignore')
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+ except Exception:
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+ page_text = ""
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+
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+ if page_text:
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+ cleaned = clean_notes_with_bloatectomy(page_text, style="remov")
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+ if cleaned:
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+ combined_text_parts.append(cleaned)
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+
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+ # (rest of the original function continues unchanged)
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+ base_summary = state.get("conversationSummary", "") or ""
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+ docs_summary = "\n\n".join(combined_text_parts)
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+ if docs_summary:
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+ state["conversationSummary"] = (base_summary + "\n\n" + docs_summary).strip()
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+ else:
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+ state["conversationSummary"] = base_summary
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+ if patient_id and str(patient_id).strip() != "":
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  action_hint = f"Use the patient ID {patient_id} to retrieve and summarize any relevant reports."
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  else:
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  action_hint = "No PID provided and the user's request does not need prior records. Provide helpful, general medical guidance and offer to retrieve records if the user later supplies a PID."