yuyan-chen/open-insect

Description

Open-Insect is curated to benchmark open-set recognition of novel species in biodiversity monitoring, with a focus on insects. It is consists of URLs pointing to image files compiled from the Global Biodiversity Information Facility (GBIF) as well as other metadata such as latitude, longitude, GBIF speciesKey, and label used to train the classifier. Open-Insect partially builds on a subset of the AMI dataset.

Run this download script to download this huggingface dataset and the original images.

It consists of in-distribution (ID), out-of-distribution (OOD), and auxiliary data (AUX) for three regions: Northeastern North America (NE-America), Western Europe (W-Europe), and Central America (C-America).

For C-America, Open-Insect also includes 197 images recently collected from Barro Colorado Island (BCI), Panama. It includes 133 species, 59 of which are likely undescribed by science. This OOD-BCI split is to provide a maximally realistic test case for open-set recognition of novel species in biodiversity monitoring. This dataset is hosted at huggingface.

Dataset Configurations and Splits

This dataset consists of metadata of 3 regions, Northeastern North America (ne-america), Western Europe (w-europe), and Central America (c-america), and links to download the original images.

The In-Distribution (ID) Set

For each region, the in-distribution data (train_id, val_id, and test_id) are from the AMI dataset, which is licensed under the MIT License.

Out-of-Distribution and Auxiliary Data

The auxiliary and out-of-distribution (OOD) images used in this dataset are sourced from the Global Biodiversity Information Facility (GBIF).

License Information

These images are provided under various open licenses, including:

• CC BY 4.0
• CC BY-NC 4.0
• CC BY-NC-SA 4.0
• CC0 1.0 (Public Domain)
• CC BY-SA 4.0
• No Rights Reserved
• CC BY 3.0
• CC BY-SA 3.0

Users of this dataset should comply with the terms of the individual licenses associated with each image. This dataset primarily contains metadata and does not redistribute the images themselves.

Dataset Structure

Open-Insect
├── c-america
│   ├── test_id.csv
│   ├── test_ood_local.csv
│   ├── test_ood_non-local.csv
│   ├── test_ood_non-moth.csv
│   ├── train_aux.csv
│   ├── train_id.csv
│   ├── val_id.csv
│   └── val_aux.csv
├── ne-america
│   ├── test_id.csv
│   ├── test_ood_local.csv
│   ├── test_ood_non-local.csv
│   ├── test_ood_non-moth.csv
│   ├── train_aux.csv
│   ├── train_id.csv
│   ├── val_id.csv
│   └── val_aux.csv
├── README.md
└── w-europe
    ├── test_id.csv
    ├── test_ood_local.csv
    ├── test_ood_non-local.csv
    ├── test_ood_non-moth.csv
    ├── train_aux.csv
    ├── train_id.csv
    ├── val_id.csv
    └── val_aux.csv

Licensing and Attribution

This dataset partially builds upon data from the AMI dataset, which is made available under the MIT License. We have used a subset of that dataset and included the original license and attribution as required.

You can find the original license in the third_party_license/LICENSE file in this repository.

The additional data in this dataset is distributed under the CC-BY-NC-SA-4.0 License.

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